D. rerio Gene: fam60a - ENSDARG00000032653 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000032653
Namefam60a
Descriptionfamily with sequence similarity 60, member A [Source:ZFIN;Acc:ZDB-GENE-041210-166]
OrganismDanio rerio (zebrafish)
Synonym(s)si:ch211-11c20.3

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
4.14e3
  • 4.14e3
86.14
  • 86.14
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
5.11e3
  • 5.11e3
82.90
  • 82.90
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
5.61e3
  • 5.61e3
  • 8.37e3
81.23
  • 81.23
  • 71.99
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
5.65e3
  • 5.65e3
  • 9.43e3
81.08
  • 81.08
  • 68.42
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
5.77e3
  • 5.77e3
  • 6.77e3
  • 7.08e3
  • 8.44e3
  • 9.48e3
80.68
  • 80.68
  • 77.32
  • 76.29
  • 71.75
  • 68.27
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
6.12e3
  • 6.12e3
79.51
  • 79.51
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
6.67e3
  • 6.67e3
77.67
  • 77.67
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
6.85e3
  • 6.85e3
  • 7.33e3
77.07
  • 77.07
  • 75.44
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
7.65e3
  • 7.65e3
74.39
  • 74.39
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
7.78e3
  • 7.78e3
73.93
  • 73.93
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
8.29e3
  • 8.29e3
72.25
  • 72.25
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
8.93e3
  • 8.93e3
70.09
  • 70.09
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
9.49e3
  • 9.49e3
68.23
  • 68.23
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
9.93e3
  • 9.93e3
66.75
  • 66.75
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.02e4
  • 1.02e4
65.94
  • 65.94
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.02e4
  • 1.02e4
65.94
  • 65.94
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.02e4
  • 1.02e4
  • 1.41e4
65.86
  • 65.86
  • 52.79
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.10e4
  • 1.10e4
63.31
  • 63.31
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.13e4
  • 1.13e4
62.13
  • 62.13
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.21e4
  • 1.21e4
59.51
  • 59.51
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
1.26e4
  • 1.26e4
  • 1.34e4
57.86
  • 57.86
  • 55.06
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.30e4
  • 1.30e4
56.44
  • 56.44
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.49e4
  • 1.49e4
50.09
  • 50.09
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.55e4
  • 1.55e4
48.06
  • 48.06
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.60e4
  • 1.60e4
46.50
  • 46.50
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLBC162866, BC162884, BX001012
EnsemblENSDARG00000032653 (fam60a)
Uniprot/SPTREMBLQ5RJ79, Q5RJ79_DANRE
ZFINZDB-GENE-041210-166 (fam60a)

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