D. rerio Gene: rps27a - ENSDARG00000032725 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000032725
Namerps27a
Descriptionribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
OrganismDanio rerio (zebrafish)
Synonym(s)hm:zeh0386, ik:tdsubc_1f2, tdsubc_1f2, xx:tdsubc_1f2, zgc:66168

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
14.0
  • 14.0
99.96
  • 99.96
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
23.7
  • 23.7
99.92
  • 99.92
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
25.2
  • 25.2
  • 1.20e3
99.92
  • 99.92
  • 95.98
AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
36.0
  • 36.0
99.88
  • 99.88
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
40.0
  • 40.0
99.87
  • 99.87
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
40.9
  • 40.9
99.87
  • 99.87
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
41.1
  • 41.1
  • 69.6
  • 121
99.87
  • 99.87
  • 99.77
  • 99.60
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
41.3
  • 41.3
99.86
  • 99.86
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
43.0
  • 43.0
99.86
  • 99.86
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000031Pharyngula:Prim-25
44.0
  • 44.0
  • 47.0
  • 48.0
  • 54.8
  • 59.3
  • 83.0
  • 93.4
  • 105
  • 116
  • 134
99.86
  • 99.86
  • 99.85
  • 99.84
  • 99.82
  • 99.80
  • 99.73
  • 99.69
  • 99.65
  • 99.62
  • 99.56
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
49.2
  • 49.2
  • 64.0
99.84
  • 99.84
  • 99.79
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
56.0
  • 56.0
99.82
  • 99.82
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000036Larval:Day 4
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000106zygote stage
61.2
  • 61.2
  • 65.7
  • 74.2
  • 75.3
  • 78.6
  • 93.8
  • 95.9
  • 101
  • 106
  • 126
  • 146
  • 183
  • 246
  • 1.37e3
99.80
  • 99.80
  • 99.78
  • 99.76
  • 99.75
  • 99.74
  • 99.69
  • 99.68
  • 99.67
  • 99.65
  • 99.58
  • 99.51
  • 99.39
  • 99.18
  • 95.42
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
67.0
  • 67.0
99.78
  • 99.78
AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
68.9
  • 68.9
  • 94.6
  • 137
  • 184
  • 226
  • 274
99.77
  • 99.77
  • 99.69
  • 99.54
  • 99.39
  • 99.25
  • 99.09
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
70.0
  • 70.0
99.77
  • 99.77
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
76.9
  • 76.9
99.75
  • 99.75
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
77.0
  • 77.0
99.75
  • 99.75
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
79.6
  • 79.6
99.74
  • 99.74
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
81.2
  • 81.2
99.73
  • 99.73
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
85.4
  • 85.4
  • 708
99.72
  • 99.72
  • 97.63
AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
96.2
  • 96.2
  • 102
99.68
  • 99.68
  • 99.66
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
96.3
  • 96.3
99.68
  • 99.68
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
102
  • 102
99.66
  • 99.66
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
113
  • 113
  • 114
  • 250
  • 431
99.62
  • 99.62
  • 99.62
  • 99.17
  • 98.56
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
163
  • 163
99.46
  • 99.46
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
209
  • 209
99.31
  • 99.31
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
265
  • 265
  • 499
  • 567
  • 845
  • 1.21e3
99.12
  • 99.12
  • 98.33
  • 98.10
  • 97.17
  • 95.97
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
427
  • 427
98.57
  • 98.57
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
437
  • 437
98.54
  • 98.54
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
3.27e3
  • 3.27e3
89.04
  • 89.04
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
3.58e3
  • 3.58e3
88.02
  • 88.02
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
3.86e3
  • 3.86e3
87.07
  • 87.07
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLBC055524, BC164449, BX324134
EnsemblENSDARG00000032725 (rps27a)
Uniprot/SPTREMBLQ7SXA3, Q7SXA3_DANRE
ZFINZDB-GENE-030131-1001 (rps27a)

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