D. rerio Gene: slc38a9 - ENSDARG00000032769 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000032769
Nameslc38a9
Descriptionsolute carrier family 38, member 9 [Source:ZFIN;Acc:ZDB-GENE-061013-597]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:154088

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
3.71e3
  • 3.71e3
87.59
  • 87.59
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
4.65e3
  • 4.65e3
84.45
  • 84.45
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
5.73e3
  • 5.73e3
80.83
  • 80.83
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
7.45e3
  • 7.45e3
75.04
  • 75.04
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
7.68e3
  • 7.68e3
74.30
  • 74.30
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
8.26e3
  • 8.26e3
72.34
  • 72.34
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
8.37e3
  • 8.37e3
71.98
  • 71.98
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
8.49e3
  • 8.49e3
  • 9.70e3
71.57
  • 71.57
  • 67.53
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
8.68e3
  • 8.68e3
  • 1.07e4
70.94
  • 70.94
  • 64.29
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
9.16e3
  • 9.16e3
69.33
  • 69.33
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
9.45e3
  • 9.45e3
68.36
  • 68.36
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
9.85e3
  • 9.85e3
67.03
  • 67.03
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
9.95e3
  • 9.95e3
66.70
  • 66.70
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.06e4
  • 1.06e4
64.50
  • 64.50
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
1.10e4
  • 1.10e4
  • 1.16e4
  • 1.33e4
  • 1.35e4
  • 1.56e4
63.01
  • 63.01
  • 61.14
  • 55.42
  • 54.94
  • 47.79
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
1.11e4
  • 1.11e4
62.78
  • 62.78
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.12e4
  • 1.12e4
  • 1.24e4
62.33
  • 62.33
  • 58.52
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.13e4
  • 1.13e4
  • 1.33e4
62.17
  • 62.17
  • 55.33
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.20e4
  • 1.20e4
  • 1.25e4
59.92
  • 59.92
  • 58.02
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.24e4
  • 1.24e4
58.50
  • 58.50
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.28e4
  • 1.28e4
57.28
  • 57.28
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.31e4
  • 1.31e4
55.98
  • 55.98
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.32e4
  • 1.32e4
55.91
  • 55.91
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.45e4
  • 1.45e4
51.29
  • 51.29
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLBC124808
EnsemblENSDARG00000032769 (slc38a9)
Uniprot/SWISSPROTQ08BA4, S38A9_DANRE
ZFINZDB-GENE-061013-597 (slc38a9)

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