D. rerio Gene: ktn1 - ENSDARG00000032802 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000032802
Namektn1
Descriptionkinectin 1 [Source:ZFIN;Acc:ZDB-GENE-030408-4]
OrganismDanio rerio (zebrafish)
Synonym(s)cb213, wu:fi20e02, wu:fi27f06
Orthologs(s)18 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
1.21e3
  • 1.21e3
  • 1.98e3
  • 2.40e3
  • 2.49e3
  • 3.97e3
95.94
  • 95.94
  • 93.38
  • 91.97
  • 91.68
  • 86.70
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.42e3
  • 1.42e3
95.24
  • 95.24
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.59e3
  • 1.59e3
  • 2.55e3
94.67
  • 94.67
  • 91.48
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.61e3
  • 1.61e3
94.62
  • 94.62
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.96e3
  • 1.96e3
  • 3.19e3
93.45
  • 93.45
  • 89.33
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
1.96e3
  • 1.96e3
  • 2.23e3
93.43
  • 93.43
  • 92.53
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
2.03e3
  • 2.03e3
93.21
  • 93.21
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
2.06e3
  • 2.06e3
93.10
  • 93.10
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.26e3
  • 2.26e3
92.43
  • 92.43
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
2.36e3
  • 2.36e3
92.09
  • 92.09
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
2.41e3
  • 2.41e3
91.94
  • 91.94
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
2.60e3
  • 2.60e3
91.30
  • 91.30
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
2.65e3
  • 2.65e3
91.12
  • 91.12
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
2.69e3
  • 2.69e3
  • 1.29e4
  • 1.34e4
91.01
  • 91.01
  • 56.79
  • 54.97
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.70e3
  • 2.70e3
90.96
  • 90.96
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
2.88e3
  • 2.88e3
  • 3.58e3
90.37
  • 90.37
  • 88.02
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
3.13e3
  • 3.13e3
89.52
  • 89.52
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
3.13e3
  • 3.13e3
  • 4.91e3
89.51
  • 89.51
  • 83.56
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
3.57e3
  • 3.57e3
88.06
  • 88.06
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
3.83e3
  • 3.83e3
  • 1.49e4
87.18
  • 87.18
  • 49.94
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
4.36e3
  • 4.36e3
85.41
  • 85.41
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
4.52e3
  • 4.52e3
84.86
  • 84.86
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
5.04e3
  • 5.04e3
83.11
  • 83.11
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
5.16e3
  • 5.16e3
  • 1.31e4
  • 1.35e4
82.72
  • 82.72
  • 56.23
  • 54.73
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
7.67e3
  • 7.67e3
74.31
  • 74.31
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
9.13e3
  • 9.13e3
69.44
  • 69.44
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
9.67e3
  • 9.67e3
  • 9.96e3
  • 1.05e4
  • 1.07e4
  • 1.12e4
67.63
  • 67.63
  • 66.65
  • 64.98
  • 64.26
  • 62.48
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000066fully formed stage
1.22e4
  • 1.22e4
  • 1.24e4
  • 1.34e4
  • 1.50e4
59.08
  • 59.08
  • 58.32
  • 55.16
  • 49.94
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0008897fin
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
1.47e4
  • 1.47e4
  • 1.50e4
50.86
  • 50.86
  • 49.94
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Orthologs

Cross-references

EnsemblENSDARG00000032802 (ktn1)
ZFINZDB-GENE-030408-4 (ktn1)
EMBLBX465227
Uniprot/SPTREMBLE7F049, E7F049_DANRE, F1Q6W6, F1Q6W6_DANRE, F1QJA1, F1QJA1_DANRE, F1R9S8, F1R9S8_DANRE

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