D. rerio Gene: fam84b - ENSDARG00000032859 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000032859
Namefam84b
Descriptionfamily with sequence similarity 84, member B [Source:ZFIN;Acc:ZDB-GENE-060929-1130]
OrganismDanio rerio (zebrafish)
Synonym(s)loc559016, si:dkey-5e12.3, zgc:153371

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
4.40e3
  • 4.40e3
85.28
  • 85.28
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
4.92e3
  • 4.92e3
83.54
  • 83.54
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
5.01e3
  • 5.01e3
83.21
  • 83.21
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
6.17e3
  • 6.17e3
79.33
  • 79.33
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
6.84e3
  • 6.84e3
  • 7.86e3
77.11
  • 77.11
  • 73.68
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
8.24e3
  • 8.24e3
72.40
  • 72.40
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
8.27e3
  • 8.27e3
72.31
  • 72.31
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
8.43e3
  • 8.43e3
71.78
  • 71.78
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
8.83e3
  • 8.83e3
70.45
  • 70.45
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
8.89e3
  • 8.89e3
70.23
  • 70.23
AEIR
  • AEIR
ZFA:0000197dorsal habenular nucleus (Danio)
  • ZFS:0000036Larval:Day 4
9.96e3
  • 9.96e3
66.67
  • 66.67
AEIR
  • AEIR
ZFA:0000302ventral habenular nucleus (Danio)
  • ZFS:0000036Larval:Day 4
9.96e3
  • 9.96e3
66.67
  • 66.67
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.14e4
  • 1.14e4
61.84
  • 61.84
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
1.15e4
  • 1.15e4
  • 1.75e4
61.54
  • 61.54
  • 41.42
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.27e4
  • 1.27e4
57.64
  • 57.64
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.36e4
  • 1.36e4
54.47
  • 54.47
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.38e4
  • 1.38e4
53.90
  • 53.90
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.39e4
  • 1.39e4
53.42
  • 53.42
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
1.40e4
  • 1.40e4
  • 1.48e4
  • 1.61e4
  • 1.64e4
  • 1.69e4
53.08
  • 53.08
  • 50.36
  • 46.17
  • 45.10
  • 43.44
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.49e4
  • 1.49e4
  • 1.52e4
50.01
  • 50.01
  • 48.95
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.51e4
  • 1.51e4
  • 1.67e4
49.53
  • 49.53
  • 44.21
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.54e4
  • 1.54e4
48.29
  • 48.29
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.57e4
  • 1.57e4
47.57
  • 47.57
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.64e4
  • 1.64e4
45.09
  • 45.09
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
1.68e4
  • 1.68e4
43.64
  • 43.64
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.79e4
  • 1.79e4
40.17
  • 40.17
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

EMBLBC171603, BC171605, BX004966
EnsemblENSDARG00000032859 (fam84b)
Uniprot/SPTREMBLQ1LYM4, Q1LYM4_DANRE
ZFINZDB-GENE-060929-1130 (fam84b)

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