D. rerio Gene: rnf185 - ENSDARG00000032997 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000032997
Namernf185
Descriptionring finger protein 185 [Source:ZFIN;Acc:ZDB-GENE-040426-1977]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:73070

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
193
  • 193
99.36
  • 99.36
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
394
  • 394
  • 1.46e4
98.68
  • 98.68
  • 51.07
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
469
  • 469
98.43
  • 98.43
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
821
  • 821
  • 839
97.26
  • 97.26
  • 97.19
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
843
  • 843
97.18
  • 97.18
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
916
  • 916
  • 2.39e3
96.94
  • 96.94
  • 92.00
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.34e3
  • 1.34e3
95.52
  • 95.52
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.53e3
  • 1.53e3
94.89
  • 94.89
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.63e3
  • 1.63e3
94.55
  • 94.55
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.65e3
  • 1.65e3
  • 2.65e3
94.47
  • 94.47
  • 91.14
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.67e3
  • 1.67e3
94.43
  • 94.43
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.91e3
  • 1.91e3
93.62
  • 93.62
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.97e3
  • 1.97e3
93.40
  • 93.40
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
2.03e3
  • 2.03e3
  • 2.92e3
93.21
  • 93.21
  • 90.24
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
2.10e3
  • 2.10e3
92.98
  • 92.98
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
2.24e3
  • 2.24e3
92.51
  • 92.51
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.28e3
  • 2.28e3
92.38
  • 92.38
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.32e3
  • 2.32e3
92.24
  • 92.24
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
2.44e3
  • 2.44e3
  • 2.45e3
  • 2.81e3
  • 3.52e3
  • 8.53e3
91.84
  • 91.84
  • 91.81
  • 90.60
  • 88.23
  • 71.45
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
2.51e3
  • 2.51e3
91.61
  • 91.61
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.61e3
  • 2.61e3
91.26
  • 91.26
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
2.80e3
  • 2.80e3
  • 3.34e3
90.62
  • 90.62
  • 88.82
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
2.92e3
  • 2.92e3
90.24
  • 90.24
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
3.15e3
  • 3.15e3
  • 1.45e4
89.47
  • 89.47
  • 51.33
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
6.95e3
  • 6.95e3
76.74
  • 76.74
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
7.13e3
  • 7.13e3
  • 8.38e3
  • 1.14e4
  • 1.28e4
  • 1.46e4
  • 1.50e4
76.12
  • 76.12
  • 71.93
  • 61.70
  • 57.18
  • 51.01
  • 49.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000004nose
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
1.14e4
  • 1.14e4
  • 1.14e4
  • 1.40e4
  • 1.41e4
61.75
  • 61.75
  • 61.75
  • 53.10
  • 52.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003050olfactory placode
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
1.20e4
  • 1.20e4
  • 1.25e4
  • 1.25e4
59.98
  • 59.98
  • 58.31
  • 58.31
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000066fully formed stage
1.32e4
  • 1.32e4
  • 1.50e4
55.82
  • 55.82
  • 49.94
AEIR
  • AEIR
  • AEIR
UBERON:0008897fin
  • UBERON:0000066fully formed stage
1.47e4
  • 1.47e4
50.86
  • 50.86
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

EMBLBC059445
EnsemblENSDARG00000032997 (rnf185)
Uniprot/SWISSPROTQ6PC78, RN185_DANRE
ZFINZDB-GENE-040426-1977 (rnf185)

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