D. rerio Gene: prkrip1 - ENSDARG00000033126 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000033126
Nameprkrip1
DescriptionPRKR interacting protein 1 (IL11 inducible) [Source:ZFIN;Acc:ZDB-GENE-111011-2]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:110608
Orthologs(s)16 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
325
  • 325
  • 573
  • 3.34e3
  • 4.25e3
  • 4.35e3
98.92
  • 98.92
  • 98.09
  • 88.83
  • 85.76
  • 85.43
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
783
  • 783
97.38
  • 97.38
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
856
  • 856
97.14
  • 97.14
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000020Gastrula:75%-epiboly
1.17e3
  • 1.17e3
  • 2.90e3
  • 2.90e3
  • 4.00e3
  • 4.46e3
  • 6.35e3
96.08
  • 96.08
  • 90.30
  • 90.28
  • 86.62
  • 85.08
  • 78.73
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.24e3
  • 1.24e3
95.84
  • 95.84
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.31e3
  • 1.31e3
95.62
  • 95.62
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.91e3
  • 1.91e3
93.60
  • 93.60
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
2.08e3
  • 2.08e3
93.04
  • 93.04
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
2.41e3
  • 2.41e3
91.95
  • 91.95
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.41e3
  • 2.41e3
91.92
  • 91.92
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.47e3
  • 2.47e3
91.73
  • 91.73
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
2.66e3
  • 2.66e3
  • 3.53e3
  • 3.88e3
  • 4.07e3
  • 4.66e3
  • 5.75e3
  • 7.04e3
  • 7.96e3
  • 7.96e3
  • 8.70e3
91.10
  • 91.10
  • 88.20
  • 87.00
  • 86.39
  • 84.39
  • 80.74
  • 76.44
  • 73.36
  • 73.34
  • 70.86
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.78e3
  • 2.78e3
90.70
  • 90.70
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
3.18e3
  • 3.18e3
89.34
  • 89.34
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
3.27e3
  • 3.27e3
  • 4.23e3
  • 5.45e3
  • 8.47e3
89.07
  • 89.07
  • 85.85
  • 81.75
  • 71.65
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
3.38e3
  • 3.38e3
  • 9.58e3
88.69
  • 88.69
  • 67.92
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
3.57e3
  • 3.57e3
  • 5.24e3
  • 6.57e3
  • 6.69e3
  • 6.73e3
  • 7.87e3
  • 8.31e3
  • 8.89e3
  • 9.19e3
  • 9.70e3
  • 1.04e4
  • 1.05e4
  • 1.17e4
  • 1.21e4
  • 1.48e4
  • 1.50e4
  • 1.50e4
88.04
  • 88.04
  • 82.45
  • 78.00
  • 77.61
  • 77.47
  • 73.63
  • 72.16
  • 70.23
  • 69.22
  • 67.51
  • 65.12
  • 64.75
  • 60.94
  • 59.45
  • 50.61
  • 49.92
  • 49.81
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
3.64e3
  • 3.64e3
87.82
  • 87.82
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
3.87e3
  • 3.87e3
87.03
  • 87.03
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
4.13e3
  • 4.13e3
86.19
  • 86.19
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
4.30e3
  • 4.30e3
85.62
  • 85.62
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
4.69e3
  • 4.69e3
84.30
  • 84.30
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
5.40e3
  • 5.40e3
81.93
  • 81.93
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
6.01e3
  • 6.01e3
  • 8.17e3
79.88
  • 79.88
  • 72.66
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
6.15e3
  • 6.15e3
  • 8.36e3
79.42
  • 79.42
  • 72.01
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
6.38e3
  • 6.38e3
78.66
  • 78.66
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
6.47e3
  • 6.47e3
78.35
  • 78.35
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
6.81e3
  • 6.81e3
77.21
  • 77.21
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
7.54e3
  • 7.54e3
74.76
  • 74.76
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
7.74e3
  • 7.74e3
74.09
  • 74.09
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
8.86e3
  • 8.86e3
70.33
  • 70.33
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
9.26e3
  • 9.26e3
  • 1.06e4
  • 1.49e4
68.98
  • 68.98
  • 64.49
  • 50.23
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
  • 1.08e4
64.20
  • 64.20
  • 63.97
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi15 species15 genesCompare expression
Bilateria16 species16 genesCompare expression

Orthology information comes from OMA : ENSDARG00000033126.

Cross-references

EnsemblENSDARG00000033126 (prkrip1)
ZFINZDB-GENE-111011-2 (prkrip1)
EMBLBC092949, BC152130, BC165305, CR376863
Uniprot/SPTREMBLB2GRY3, B2GRY3_DANRE
Uniprot/SWISSPROTPKRI1_DANRE, Q568A0

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