D. rerio Gene: mcm6l - ENSDARG00000033231 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000033231
Namemcm6l
DescriptionMCM6 minichromosome maintenance deficient 6, like [Source:ZFIN;Acc:ZDB-GENE-050913-141]
OrganismDanio rerio (zebrafish)
Synonym(s)mcm6, zgc:112244
Orthologs(s)8 orthologs
Paralog(s)6 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
309
  • 309
98.97
  • 98.97
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
550
  • 550
98.16
  • 98.16
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
559
  • 559
  • 1.50e4
98.13
  • 98.13
  • 49.89
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
775
  • 775
  • 1.01e3
  • 1.36e3
  • 1.69e3
  • 1.70e3
97.41
  • 97.41
  • 96.61
  • 95.44
  • 94.35
  • 94.32
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
831
  • 831
97.22
  • 97.22
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.01e3
  • 1.01e3
96.64
  • 96.64
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.25e3
  • 1.25e3
95.81
  • 95.81
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
1.32e3
  • 1.32e3
  • 2.58e3
  • 4.28e3
  • 4.63e3
  • 8.30e3
  • 8.32e3
95.60
  • 95.60
  • 91.37
  • 85.68
  • 84.48
  • 72.20
  • 72.13
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.52e3
  • 2.52e3
91.56
  • 91.56
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
  • UBERON:0004707pharyngula stage
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • UBERON:0000066fully formed stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000104life cycle
  • ZFS:0000042Juvenile:Days 30-44
2.83e3
  • 2.83e3
  • 4.53e3
  • 4.98e3
  • 6.54e3
  • 6.64e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.97e3
  • 7.03e3
  • 7.26e3
  • 7.47e3
  • 7.47e3
  • 7.91e3
  • 8.89e3
  • 8.96e3
  • 8.96e3
  • 8.98e3
  • 1.30e4
  • 1.30e4
  • 1.41e4
  • 1.42e4
  • 1.43e4
  • 1.45e4
  • 1.45e4
  • 1.47e4
  • 1.48e4
90.53
  • 90.53
  • 84.84
  • 83.33
  • 78.12
  • 77.77
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 76.66
  • 76.46
  • 75.69
  • 74.99
  • 74.99
  • 73.52
  • 70.23
  • 69.99
  • 69.99
  • 69.93
  • 56.63
  • 56.63
  • 52.87
  • 52.58
  • 52.14
  • 51.42
  • 51.36
  • 50.90
  • 50.47
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
2.85e3
  • 2.85e3
90.45
  • 90.45
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
5.29e3
  • 5.29e3
82.29
  • 82.29
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
6.31e3
  • 6.31e3
78.88
  • 78.88
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
8.05e3
  • 8.05e3
73.03
  • 73.03
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
1.12e4
  • 1.12e4
  • 1.50e4
62.51
  • 62.51
  • 49.92
AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.19e4
  • 1.19e4
60.29
  • 60.29
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
1.23e4
  • 1.23e4
  • 1.38e4
  • 1.39e4
  • 1.40e4
  • 1.84e4
  • 1.90e4
  • 2.04e4
58.91
  • 58.91
  • 53.87
  • 53.45
  • 53.07
  • 38.31
  • 36.38
  • 31.64
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.31e4
  • 1.31e4
56.17
  • 56.17
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.37e4
  • 1.37e4
54.18
  • 54.18
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
1.62e4
  • 1.62e4
  • 2.16e4
45.79
  • 45.79
  • 27.64
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.71e4
  • 1.71e4
42.88
  • 42.88
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.81e4
  • 1.81e4
39.30
  • 39.30
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
2.09e4
  • 2.09e4
30.10
  • 30.10
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.11e4
  • 2.11e4
29.40
  • 29.40
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
2.11e4
  • 2.11e4
29.37
  • 29.37
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.41e4
  • 2.41e4
19.24
  • 19.24
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression
Eukaryota6 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000033231.

Cross-references

EnsemblENSDARG00000033231 (mcm6l)
ZFINZDB-GENE-050913-141 (mcm6l)
EMBLBX927101
Uniprot/SPTREMBLB0S7S1, B0S7S1_DANRE, F1R816, F1R816_DANRE

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