D. rerio Gene: osbpl3a - ENSDARG00000033251 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000033251
Nameosbpl3a
Descriptionoxysterol binding protein-like 3a [Source:ZFIN;Acc:ZDB-GENE-040912-77]
OrganismDanio rerio (zebrafish)
Synonym(s)osbpl3, zgc:101089
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
929
  • 929
96.89
  • 96.89
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.17e3
  • 1.17e3
96.10
  • 96.10
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.39e3
  • 1.39e3
  • 1.87e4
95.36
  • 95.36
  • 37.40
AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
1.84e3
  • 1.84e3
  • 5.14e3
93.83
  • 93.83
  • 82.79
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
2.29e3
  • 2.29e3
92.35
  • 92.35
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.70e3
  • 2.70e3
90.96
  • 90.96
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.74e3
  • 2.74e3
90.83
  • 90.83
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000015Blastula:Dome
3.31e3
  • 3.31e3
  • 3.42e3
  • 8.49e3
  • 1.21e4
  • 1.31e4
88.92
  • 88.92
  • 88.55
  • 71.59
  • 59.37
  • 56.09
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
3.71e3
  • 3.71e3
87.57
  • 87.57
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
4.03e3
  • 4.03e3
86.50
  • 86.50
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
4.90e3
  • 4.90e3
83.58
  • 83.58
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
4.93e3
  • 4.93e3
83.49
  • 83.49
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
5.22e3
  • 5.22e3
  • 9.68e3
  • 1.02e4
  • 1.06e4
  • 1.11e4
  • 1.12e4
  • 1.20e4
  • 1.24e4
  • 1.26e4
  • 1.34e4
82.51
  • 82.51
  • 67.58
  • 65.95
  • 64.55
  • 62.83
  • 62.46
  • 59.84
  • 58.47
  • 57.88
  • 55.08
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
7.05e3
  • 7.05e3
76.39
  • 76.39
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
7.51e3
  • 7.51e3
74.86
  • 74.86
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
9.37e3
  • 9.37e3
68.62
  • 68.62
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000037Larval:Day 5
9.91e3
  • 9.91e3
  • 1.08e4
  • 1.21e4
  • 1.22e4
  • 1.23e4
  • 1.23e4
  • 1.24e4
  • 1.24e4
  • 1.25e4
  • 1.28e4
  • 1.29e4
  • 1.29e4
  • 1.30e4
  • 1.34e4
66.82
  • 66.82
  • 63.81
  • 59.46
  • 59.02
  • 58.91
  • 58.85
  • 58.57
  • 58.38
  • 58.26
  • 57.16
  • 56.88
  • 56.76
  • 56.63
  • 55.01
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.00e4
  • 1.00e4
66.42
  • 66.42
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.06e4
  • 1.06e4
64.67
  • 64.67
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.07e4
  • 1.07e4
64.15
  • 64.15
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.08e4
  • 1.08e4
63.78
  • 63.78
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.08e4
  • 1.08e4
63.68
  • 63.68
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.12e4
  • 1.12e4
62.43
  • 62.43
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.15e4
  • 1.15e4
61.38
  • 61.38
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.17e4
  • 1.17e4
60.92
  • 60.92
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000019Gastrula:Shield
1.18e4
  • 1.18e4
  • 1.18e4
  • 1.19e4
  • 1.26e4
  • 1.30e4
  • 1.56e4
60.46
  • 60.46
  • 60.41
  • 60.01
  • 57.65
  • 56.33
  • 47.67
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
1.20e4
  • 1.20e4
  • 1.50e4
59.93
  • 59.93
  • 49.90
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
1.20e4
  • 1.20e4
  • 1.27e4
  • 1.31e4
59.92
  • 59.92
  • 57.49
  • 56.15
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.27e4
  • 1.27e4
57.60
  • 57.60
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.29e4
  • 1.29e4
  • 1.73e4
56.88
  • 56.88
  • 42.06
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Chordata2 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000033251.

Cross-references

EnsemblENSDARG00000033251 (osbpl3a)
ZFINZDB-GENE-040912-77 (osbpl3a)
EMBLBX640464
Uniprot/SPTREMBLI3IT48, I3IT48_DANRE, Q1LW95, Q1LW95_DANRE

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