D. rerio Gene: zgc:158387 - ENSDARG00000033364 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000033364
Namezgc:158387
Descriptionzgc:158387 [Source:ZFIN;Acc:ZDB-GENE-061215-48]
OrganismDanio rerio (zebrafish)
Synonym(s)im:6905414, mgstl, wu:fa20h12

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
512
  • 512
  • 649
98.29
  • 98.29
  • 97.83
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
560
  • 560
  • 1.08e3
98.13
  • 98.13
  • 96.37
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
616
  • 616
  • 1.31e4
97.94
  • 97.94
  • 56.23
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
626
  • 626
  • 4.98e3
97.91
  • 97.91
  • 83.34
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
812
  • 812
97.28
  • 97.28
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
873
  • 873
  • 940
  • 968
  • 1.44e3
  • 1.73e3
97.08
  • 97.08
  • 96.86
  • 96.76
  • 95.17
  • 94.23
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.07e3
  • 1.07e3
  • 1.84e3
96.43
  • 96.43
  • 93.85
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.32e3
  • 1.32e3
95.57
  • 95.57
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.33e3
  • 1.33e3
95.54
  • 95.54
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.34e3
  • 1.34e3
95.50
  • 95.50
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
1.55e3
  • 1.55e3
  • 3.51e3
94.81
  • 94.81
  • 88.23
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.66e3
  • 1.66e3
94.43
  • 94.43
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.70e3
  • 1.70e3
94.30
  • 94.30
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.72e3
  • 1.72e3
  • 1.80e3
94.24
  • 94.24
  • 93.96
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.77e3
  • 1.77e3
94.08
  • 94.08
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
2.00e3
  • 2.00e3
93.31
  • 93.31
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
2.06e3
  • 2.06e3
93.10
  • 93.10
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
2.08e3
  • 2.08e3
93.02
  • 93.02
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.09e3
  • 2.09e3
92.99
  • 92.99
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
2.17e3
  • 2.17e3
92.74
  • 92.74
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
2.50e3
  • 2.50e3
91.63
  • 91.63
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
2.84e3
  • 2.84e3
90.48
  • 90.48
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
3.94e3
  • 3.94e3
86.83
  • 86.83
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
4.30e3
  • 4.30e3
85.59
  • 85.59
AEIR
  • AEIR
UBERON:2001076intestinal bulb
  • ZFS:0000037Larval:Day 5
8.96e3
  • 8.96e3
69.99
  • 69.99
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
9.60e3
  • 9.60e3
67.87
  • 67.87
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

EMBLBC128855, BX465191
EnsemblENSDARG00000033364 (zgc:158387)
Uniprot/SPTREMBLA1A5Y1, A1A5Y1_DANRE
ZFINZDB-GENE-061215-48 (zgc:158387)

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