D. rerio Gene: grifin - ENSDARG00000033382 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000033382
Namegrifin
Descriptiongalectin-related inter-fiber protein [Source:ZFIN;Acc:ZDB-GENE-040801-163]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:92897

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
772
  • 772
  • 1.73e3
97.42
  • 97.42
  • 94.22
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
779
  • 779
97.39
  • 97.39
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.14e3
  • 1.14e3
  • 5.02e3
96.20
  • 96.20
  • 83.19
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
2.49e3
  • 2.49e3
  • 8.31e3
  • 1.25e4
  • 1.82e4
  • 2.02e4
91.66
  • 91.66
  • 72.18
  • 58.02
  • 39.15
  • 32.30
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000019Gastrula:Shield
5.77e3
  • 5.77e3
80.67
  • 80.67
AEIR
  • AEIR
UBERON:0000965lens of camera-type eye
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000032Pharyngula:High-pec
8.96e3
  • 8.96e3
  • 1.02e4
  • 1.05e4
  • 1.07e4
69.99
  • 69.99
  • 65.77
  • 64.98
  • 64.27
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005426lens vesicle
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
9.67e3
  • 9.67e3
  • 1.03e4
  • 1.05e4
67.63
  • 67.63
  • 65.61
  • 64.98
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.63e4
  • 1.63e4
45.53
  • 45.53
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.75e4
  • 1.75e4
41.33
  • 41.33
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.94e4
  • 1.94e4
35.18
  • 35.18
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.95e4
  • 1.95e4
34.56
  • 34.56
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
2.08e4
  • 2.08e4
30.37
  • 30.37
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
2.33e4
  • 2.33e4
21.84
  • 21.84
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

EMBLBC076353
EnsemblENSDARG00000033382 (grifin)
Uniprot/SWISSPROTGRIFN_DANRE, Q6DGJ1
ZFINZDB-GENE-040801-163 (grifin)

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