D. rerio Gene: ube2j1 - ENSDARG00000033489 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000033489
Nameube2j1
Descriptionubiquitin-conjugating enzyme E2, J1 [Source:ZFIN;Acc:ZDB-GENE-040426-2853]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:63554

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
3.35e3
  • 3.35e3
88.80
  • 88.80
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
4.29e3
  • 4.29e3
  • 5.45e3
85.62
  • 85.62
  • 81.74
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
4.48e3
  • 4.48e3
85.00
  • 85.00
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
5.17e3
  • 5.17e3
  • 6.86e3
82.69
  • 82.69
  • 77.04
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
6.26e3
  • 6.26e3
79.03
  • 79.03
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
6.49e3
  • 6.49e3
78.27
  • 78.27
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
6.62e3
  • 6.62e3
77.84
  • 77.84
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
6.64e3
  • 6.64e3
77.75
  • 77.75
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
6.95e3
  • 6.95e3
76.72
  • 76.72
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
7.12e3
  • 7.12e3
76.16
  • 76.16
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
7.22e3
  • 7.22e3
75.84
  • 75.84
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
7.25e3
  • 7.25e3
75.71
  • 75.71
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
7.31e3
  • 7.31e3
  • 8.51e3
  • 8.85e3
  • 9.39e3
  • 9.50e3
75.52
  • 75.52
  • 71.52
  • 70.38
  • 68.58
  • 68.19
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
7.43e3
  • 7.43e3
75.11
  • 75.11
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
7.80e3
  • 7.80e3
  • 8.57e3
73.90
  • 73.90
  • 71.32
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
7.80e3
  • 7.80e3
  • 9.34e3
73.90
  • 73.90
  • 68.73
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
7.85e3
  • 7.85e3
73.70
  • 73.70
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
8.15e3
  • 8.15e3
72.72
  • 72.72
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
8.38e3
  • 8.38e3
71.95
  • 71.95
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
8.51e3
  • 8.51e3
71.51
  • 71.51
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
8.79e3
  • 8.79e3
70.56
  • 70.56
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
8.85e3
  • 8.85e3
70.35
  • 70.35
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
9.01e3
  • 9.01e3
69.83
  • 69.83
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.10e4
  • 1.10e4
63.12
  • 63.12
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLBC061451, BX248418
EnsemblENSDARG00000033489 (ube2j1)
Uniprot/SPTREMBLQ6P7Y0, Q6P7Y0_DANRE
ZFINZDB-GENE-040426-2853 (ube2j1)

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