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D. rerio Gene: ccdc115 - ENSDARG00000033533 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000033533
Nameccdc115
Descriptioncoiled-coil domain containing 115 [Source:ZFIN;Acc:ZDB-GENE-050227-20]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:113121
Orthologs(s)16 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
2.16e3
  • 2.16e3
92.76
  • 92.76
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.18e3
  • 2.18e3
92.72
  • 92.72
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.56e3
  • 2.56e3
91.42
  • 91.42
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
3.77e3
  • 3.77e3
  • 8.62e3
87.40
  • 87.40
  • 71.14
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
3.86e3
  • 3.86e3
87.08
  • 87.08
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
3.91e3
  • 3.91e3
86.92
  • 86.92
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
4.12e3
  • 4.12e3
86.19
  • 86.19
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
4.24e3
  • 4.24e3
85.82
  • 85.82
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
4.55e3
  • 4.55e3
84.77
  • 84.77
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000109gastrula stage
4.63e3
  • 4.63e3
  • 9.34e3
  • 9.39e3
  • 9.64e3
  • 1.06e4
  • 1.22e4
84.49
  • 84.49
  • 68.72
  • 68.55
  • 67.73
  • 64.49
  • 59.28
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
5.01e3
  • 5.01e3
  • 9.97e3
83.23
  • 83.23
  • 66.60
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
5.28e3
  • 5.28e3
82.31
  • 82.31
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000024Segmentation:5-9 somites
  • UBERON:0000068embryo stage
5.43e3
  • 5.43e3
  • 5.47e3
  • 8.81e3
  • 8.88e3
  • 9.70e3
  • 1.06e4
  • 1.09e4
  • 1.11e4
  • 1.12e4
  • 1.26e4
81.82
  • 81.82
  • 81.69
  • 70.49
  • 70.27
  • 67.54
  • 64.38
  • 63.35
  • 62.82
  • 62.65
  • 57.66
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
5.59e3
  • 5.59e3
81.29
  • 81.29
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
5.87e3
  • 5.87e3
80.35
  • 80.35
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
6.11e3
  • 6.11e3
  • 8.88e3
  • 9.86e3
  • 1.07e4
  • 1.28e4
79.53
  • 79.53
  • 70.28
  • 66.98
  • 64.19
  • 57.07
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
6.33e3
  • 6.33e3
78.82
  • 78.82
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000018Gastrula:Germ-ring
  • UBERON:0000106zygote stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000015Blastula:Dome
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000026Segmentation:14-19 somites
6.40e3
  • 6.40e3
  • 6.40e3
  • 6.40e3
  • 6.64e3
  • 6.89e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.97e3
  • 8.53e3
  • 8.54e3
  • 8.71e3
  • 8.79e3
  • 8.79e3
  • 8.96e3
  • 8.96e3
  • 9.13e3
  • 9.13e3
  • 9.13e3
  • 9.71e3
  • 9.96e3
  • 9.96e3
78.57
  • 78.57
  • 78.57
  • 78.57
  • 77.77
  • 76.92
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 73.32
  • 71.43
  • 71.41
  • 70.82
  • 70.57
  • 70.57
  • 69.99
  • 69.98
  • 69.43
  • 69.43
  • 69.43
  • 67.48
  • 66.66
  • 66.65
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
6.75e3
  • 6.75e3
  • 6.94e3
77.42
  • 77.42
  • 76.77
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
6.78e3
  • 6.78e3
77.30
  • 77.30
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
6.94e3
  • 6.94e3
76.76
  • 76.76
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
7.45e3
  • 7.45e3
  • 9.55e3
  • 1.22e4
75.05
  • 75.05
  • 68.03
  • 59.04
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
7.48e3
  • 7.48e3
74.97
  • 74.97
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
7.78e3
  • 7.78e3
73.96
  • 73.96
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
7.97e3
  • 7.97e3
  • 8.03e3
  • 9.46e3
  • 9.52e3
73.32
  • 73.32
  • 73.10
  • 68.33
  • 68.13
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
8.17e3
  • 8.17e3
72.63
  • 72.63
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
8.74e3
  • 8.74e3
70.75
  • 70.75
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.04e4
  • 1.04e4
65.25
  • 65.25
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
1.08e4
  • 1.08e4
  • 1.10e4
63.98
  • 63.98
  • 63.01
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.09e4
  • 1.09e4
63.43
  • 63.43
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000024Segmentation:5-9 somites
  • UBERON:0000106zygote stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000042Juvenile:Days 30-44
  • UBERON:0000068embryo stage
  • UBERON:0000066fully formed stage
1.11e4
  • 1.11e4
  • 1.16e4
  • 1.19e4
  • 1.22e4
  • 1.22e4
  • 1.30e4
  • 1.30e4
  • 1.33e4
  • 1.33e4
  • 1.34e4
  • 1.38e4
  • 1.38e4
  • 1.39e4
  • 1.39e4
  • 1.48e4
  • 1.49e4
62.76
  • 62.76
  • 61.31
  • 60.24
  • 59.18
  • 59.13
  • 56.57
  • 56.32
  • 55.58
  • 55.34
  • 55.00
  • 53.74
  • 53.65
  • 53.41
  • 53.32
  • 50.61
  • 50.25
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.19e4
  • 1.19e4
60.28
  • 60.28
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.25e4
  • 1.25e4
58.11
  • 58.11
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.26e4
  • 1.26e4
57.77
  • 57.77
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.40e4
  • 1.40e4
53.03
  • 53.03
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Cross-references

EnsemblENSDARG00000033533 (ccdc115)
ZFINZDB-GENE-050227-20 (ccdc115)
EMBLCR388168
Uniprot/SPTREMBLF1QSB2, F1QSB2_DANRE

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