D. rerio Gene: tshba - ENSDARG00000033726 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000033726
Nametshba
Descriptionthyroid stimulating hormone, beta subunit, a [Source:ZFIN;Acc:ZDB-GENE-030513-3]
OrganismDanio rerio (zebrafish)
Synonym(s)tshb, tshb {eco:0000313|embl:aai63604.1,gn eco:0000313|ensembl:ensdarp00000049999}

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000476thyrotroph
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
  • ZFS:0000038Larval:Day 6
  • ZFS:0000039Larval:Days 7-13
  • ZFS:0000040Larval:Days 14-20
4.98e3
  • 4.98e3
  • 7.47e3
  • 1.49e4
  • 1.49e4
  • 1.49e4
  • 1.49e4
83.34
  • 83.34
  • 75.00
  • 50.00
  • 50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009122adenohypophyseal placode
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
7.47e3
  • 7.47e3
  • 8.53e3
  • 1.24e4
75.00
  • 75.00
  • 71.43
  • 58.33
AEIR
  • AEIR
  • AEIR
  • AEIR
ZFA:0005581proximal pars anterior (Danio)
  • ZFS:0000037Larval:Day 5
7.47e3
  • 7.47e3
75.00
  • 75.00
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.02e4
  • 1.02e4
65.95
  • 65.95
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000031Pharyngula:Prim-25
1.12e4
  • 1.12e4
  • 1.49e4
62.50
  • 62.50
  • 49.99
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.40e4
  • 1.40e4
  • 2.33e4
52.97
  • 52.97
  • 22.14
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.60e4
  • 1.60e4
46.40
  • 46.40
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.72e4
  • 1.72e4
  • 1.74e4
42.55
  • 42.55
  • 41.80
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
1.87e4
  • 1.87e4
  • 1.97e4
  • 2.19e4
  • 2.21e4
  • 2.66e4
37.41
  • 37.41
  • 34.12
  • 26.70
  • 25.96
  • 10.89
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
2.01e4
  • 2.01e4
32.85
  • 32.85
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
2.04e4
  • 2.04e4
31.53
  • 31.53
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.44e4
  • 2.44e4
18.20
  • 18.20
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

EMBLBC163604, BC163605, BX005150
EnsemblENSDARG00000033726 (tshba)
Uniprot/SPTREMBLB3DJU0, B3DJU0_DANRE
ZFINZDB-GENE-030513-3 (tshba)

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