D. rerio Gene: rbm48 - ENSDARG00000033754 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000033754
Namerbm48
DescriptionRNA binding motif protein 48 [Source:ZFIN;Acc:ZDB-GENE-060328-1]
OrganismDanio rerio (zebrafish)
Synonym(s)dkfzp564o0523

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
1.79e3
  • 1.79e3
  • 1.50e4
93.99
  • 93.99
  • 49.89
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.56e3
  • 2.56e3
91.43
  • 91.43
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.60e3
  • 2.60e3
91.29
  • 91.29
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
3.48e3
  • 3.48e3
88.36
  • 88.36
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
3.61e3
  • 3.61e3
87.91
  • 87.91
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
3.69e3
  • 3.69e3
87.65
  • 87.65
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
4.33e3
  • 4.33e3
85.51
  • 85.51
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
5.73e3
  • 5.73e3
80.83
  • 80.83
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
5.84e3
  • 5.84e3
  • 5.92e3
80.46
  • 80.46
  • 80.18
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
6.01e3
  • 6.01e3
  • 7.09e3
79.87
  • 79.87
  • 76.26
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
6.24e3
  • 6.24e3
  • 1.17e4
79.12
  • 79.12
  • 60.70
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
6.30e3
  • 6.30e3
78.91
  • 78.91
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
6.35e3
  • 6.35e3
78.73
  • 78.73
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
6.52e3
  • 6.52e3
  • 7.55e3
78.17
  • 78.17
  • 74.71
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
6.62e3
  • 6.62e3
77.84
  • 77.84
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
7.10e3
  • 7.10e3
76.22
  • 76.22
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
7.37e3
  • 7.37e3
75.31
  • 75.31
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
7.58e3
  • 7.58e3
  • 8.26e3
  • 8.31e3
  • 9.21e3
  • 9.95e3
74.63
  • 74.63
  • 72.35
  • 72.18
  • 69.17
  • 66.70
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
8.30e3
  • 8.30e3
72.21
  • 72.21
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
8.45e3
  • 8.45e3
  • 9.68e3
71.70
  • 71.70
  • 67.57
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
8.57e3
  • 8.57e3
71.31
  • 71.31
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
8.93e3
  • 8.93e3
70.11
  • 70.11
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
9.07e3
  • 9.07e3
69.64
  • 69.64
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
65.10
  • 65.10
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
1.10e4
  • 1.10e4
63.10
  • 63.10
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.16e4
  • 1.16e4
61.23
  • 61.23
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000068embryo stage
  • ZFS:0000049segmentation
1.45e4
  • 1.45e4
  • 1.49e4
51.42
  • 51.42
  • 49.95
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EMBLBX510986
EnsemblENSDARG00000033754 (rbm48)
Uniprot/SPTREMBLZ4YHP6, Z4YHP6_DANRE
ZFINZDB-GENE-060328-1 (rbm48)

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