D. rerio Gene: ncaph2 - ENSDARG00000033757 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000033757
Namencaph2
Descriptionnon-SMC condensin II complex, subunit H2 [Source:ZFIN;Acc:ZDB-GENE-041210-172]
OrganismDanio rerio (zebrafish)
Synonym(s)a6h8r1, si:dkey-202b22.2

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.09e3
  • 2.09e3
93.00
  • 93.00
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
2.72e3
  • 2.72e3
90.90
  • 90.90
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
3.27e3
  • 3.27e3
  • 3.67e3
89.06
  • 89.06
  • 87.72
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
3.48e3
  • 3.48e3
  • 3.69e3
88.34
  • 88.34
  • 87.64
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
3.55e3
  • 3.55e3
  • 4.01e3
  • 4.50e3
  • 8.42e3
  • 1.20e4
88.12
  • 88.12
  • 86.59
  • 84.93
  • 71.82
  • 59.70
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
4.17e3
  • 4.17e3
  • 1.09e4
86.03
  • 86.03
  • 63.53
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
4.38e3
  • 4.38e3
85.35
  • 85.35
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
5.04e3
  • 5.04e3
83.13
  • 83.13
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
5.13e3
  • 5.13e3
82.82
  • 82.82
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
5.81e3
  • 5.81e3
80.54
  • 80.54
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
6.54e3
  • 6.54e3
78.10
  • 78.10
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
6.63e3
  • 6.63e3
77.79
  • 77.79
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
6.76e3
  • 6.76e3
77.38
  • 77.38
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
6.76e3
  • 6.76e3
77.38
  • 77.38
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
7.10e3
  • 7.10e3
  • 1.61e4
76.21
  • 76.21
  • 46.24
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
9.94e3
  • 9.94e3
66.72
  • 66.72
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.01e4
  • 1.01e4
66.20
  • 66.20
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.05e4
  • 1.05e4
  • 1.87e4
64.91
  • 64.91
  • 37.49
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.08e4
  • 1.08e4
63.87
  • 63.87
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.09e4
  • 1.09e4
63.46
  • 63.46
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.14e4
  • 1.14e4
61.79
  • 61.79
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.27e4
  • 1.27e4
57.38
  • 57.38
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.34e4
  • 1.34e4
55.05
  • 55.05
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.60e4
  • 1.60e4
46.47
  • 46.47
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.72e4
  • 1.72e4
42.26
  • 42.26
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLBC146715, BX649398
EnsemblENSDARG00000033757 (ncaph2)
Uniprot/SWISSPROTCNDH2_DANRE, Q5RH01
ZFINZDB-GENE-041210-172 (ncaph2)

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