D. rerio Gene: ampd1 - ENSDARG00000033832 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000033832
Nameampd1
Descriptionadenosine monophosphate deaminase 1 (isoform M) [Source:ZFIN;Acc:ZDB-GENE-040426-1906]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:77905
Orthologs(s)19 orthologs
Paralog(s)4 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
164
  • 164
99.45
  • 99.45
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
173
  • 173
99.43
  • 99.43
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
221
  • 221
99.26
  • 99.26
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
378
  • 378
  • 997
  • 8.55e3
98.74
  • 98.74
  • 96.66
  • 71.36
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
396
  • 396
  • 3.69e3
98.68
  • 98.68
  • 87.65
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.16e3
  • 1.16e3
  • 1.36e4
96.14
  • 96.14
  • 54.61
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
3.10e3
  • 3.10e3
89.61
  • 89.61
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
3.85e3
  • 3.85e3
87.10
  • 87.10
AEIR
  • AEIR
UBERON:0007269pectoral appendage musculature
  • ZFS:0000037Larval:Day 5
4.27e3
  • 4.27e3
85.71
  • 85.71
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
5.28e3
  • 5.28e3
82.34
  • 82.34
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
5.77e3
  • 5.77e3
  • 9.96e3
  • 1.25e4
  • 1.34e4
  • 1.44e4
80.67
  • 80.67
  • 66.65
  • 57.99
  • 55.05
  • 51.82
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0008229craniocervical region musculature
  • ZFS:0000037Larval:Day 5
5.97e3
  • 5.97e3
80.00
  • 80.00
AEIR
  • AEIR
UBERON:0003082myotome
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
7.47e3
  • 7.47e3
  • 1.05e4
  • 1.08e4
75.00
  • 75.00
  • 64.98
  • 63.87
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
7.68e3
  • 7.68e3
74.29
  • 74.29
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.18e4
  • 1.18e4
  • 1.39e4
60.50
  • 60.50
  • 53.35
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.28e4
  • 1.28e4
57.03
  • 57.03
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.29e4
  • 1.29e4
56.64
  • 56.64
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.38e4
  • 1.38e4
53.83
  • 53.83
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
1.40e4
  • 1.40e4
  • 1.64e4
53.21
  • 53.21
  • 45.09
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
1.44e4
  • 1.44e4
  • 1.52e4
51.63
  • 51.63
  • 49.19
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.97e4
  • 1.97e4
33.99
  • 33.99
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
2.02e4
  • 2.02e4
32.23
  • 32.23
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata2 genesCompare expression
Eukaryota4 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000033832.

Cross-references

EnsemblENSDARG00000033832 (ampd1)
ZFINZDB-GENE-040426-1906 (ampd1)
EMBLBC063996, CT027601
Uniprot/SPTREMBLQ6P3G5, Q6P3G5_DANRE

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