D. rerio Gene: mrrf - ENSDARG00000034174 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000034174
Namemrrf
Descriptionmitochondrial ribosome recycling factor [Source:ZFIN;Acc:ZDB-GENE-040704-12]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:91914
Orthologs(s)22 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
5.18e3
  • 5.18e3
82.65
  • 82.65
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
5.30e3
  • 5.30e3
82.27
  • 82.27
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
5.45e3
  • 5.45e3
81.76
  • 81.76
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000026Segmentation:14-19 somites
  • UBERON:0000068embryo stage
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000030Pharyngula:Prim-15
5.48e3
  • 5.48e3
  • 7.66e3
  • 7.94e3
  • 8.66e3
  • 8.84e3
  • 1.02e4
  • 1.08e4
  • 1.09e4
  • 1.18e4
  • 1.23e4
81.66
  • 81.66
  • 74.34
  • 73.42
  • 71.02
  • 70.42
  • 65.71
  • 63.89
  • 63.43
  • 60.35
  • 58.66
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
5.62e3
  • 5.62e3
  • 6.34e3
81.18
  • 81.18
  • 78.77
AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
5.87e3
  • 5.87e3
  • 1.29e4
80.33
  • 80.33
  • 56.86
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
6.36e3
  • 6.36e3
  • 1.41e4
78.71
  • 78.71
  • 52.88
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
6.99e3
  • 6.99e3
  • 1.47e4
76.61
  • 76.61
  • 50.63
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
7.01e3
  • 7.01e3
76.53
  • 76.53
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
7.24e3
  • 7.24e3
75.76
  • 75.76
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
7.31e3
  • 7.31e3
75.52
  • 75.52
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
7.46e3
  • 7.46e3
75.04
  • 75.04
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
7.54e3
  • 7.54e3
  • 9.39e3
  • 9.68e3
74.77
  • 74.77
  • 68.55
  • 67.59
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
7.60e3
  • 7.60e3
  • 9.11e3
  • 1.24e4
74.57
  • 74.57
  • 69.49
  • 58.37
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
8.32e3
  • 8.32e3
72.13
  • 72.13
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
8.34e3
  • 8.34e3
72.07
  • 72.07
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
8.47e3
  • 8.47e3
  • 9.73e3
71.65
  • 71.65
  • 67.41
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
8.47e3
  • 8.47e3
  • 1.50e4
71.64
  • 71.64
  • 49.92
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
8.76e3
  • 8.76e3
70.67
  • 70.67
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
8.93e3
  • 8.93e3
70.09
  • 70.09
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
9.13e3
  • 9.13e3
  • 9.17e3
  • 1.10e4
  • 1.17e4
  • 1.18e4
69.42
  • 69.42
  • 69.30
  • 63.17
  • 60.66
  • 60.58
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
9.57e3
  • 9.57e3
67.95
  • 67.95
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
9.97e3
  • 9.97e3
66.63
  • 66.63
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
9.98e3
  • 9.98e3
66.60
  • 66.60
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
65.10
  • 65.10
AEIR
  • AEIR
UBERON:0001891midbrain
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
1.08e4
  • 1.08e4
  • 1.08e4
  • 1.12e4
  • 1.14e4
  • 1.20e4
63.87
  • 63.87
  • 63.87
  • 62.48
  • 61.75
  • 59.98
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
1.09e4
  • 1.09e4
  • 1.12e4
63.63
  • 63.63
  • 62.49
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
1.10e4
  • 1.10e4
  • 1.12e4
  • 1.17e4
  • 1.33e4
  • 1.42e4
63.02
  • 63.02
  • 62.66
  • 60.99
  • 55.49
  • 52.56
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.11e4
  • 1.11e4
62.67
  • 62.67
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000036Larval:Day 4
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000106zygote stage
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
1.12e4
  • 1.12e4
  • 1.18e4
  • 1.20e4
  • 1.21e4
  • 1.25e4
  • 1.26e4
  • 1.28e4
  • 1.30e4
  • 1.33e4
  • 1.33e4
  • 1.35e4
  • 1.36e4
  • 1.37e4
  • 1.38e4
  • 1.46e4
  • 1.46e4
62.53
  • 62.53
  • 60.53
  • 59.72
  • 59.61
  • 58.23
  • 57.86
  • 57.01
  • 56.56
  • 55.49
  • 55.38
  • 54.94
  • 54.45
  • 54.28
  • 53.66
  • 51.12
  • 51.01
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
1.14e4
  • 1.14e4
  • 1.20e4
  • 1.23e4
  • 1.25e4
  • 1.25e4
  • 1.25e4
  • 1.27e4
61.88
  • 61.88
  • 59.98
  • 58.80
  • 58.31
  • 58.31
  • 58.31
  • 57.47
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.15e4
  • 1.15e4
61.65
  • 61.65
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
1.15e4
  • 1.15e4
  • 1.17e4
61.56
  • 61.56
  • 60.69
AEIR
  • AEIR
  • AEIR
UBERON:0010312immature eye
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000028Segmentation:26+ somites
1.16e4
  • 1.16e4
  • 1.18e4
  • 1.21e4
  • 1.23e4
61.09
  • 61.09
  • 60.50
  • 59.50
  • 58.80
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005886post-hyoid pharyngeal arch skeleton
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
1.26e4
  • 1.26e4
  • 1.26e4
  • 1.27e4
  • 1.27e4
  • 1.28e4
  • 1.41e4
  • 1.41e4
57.87
  • 57.87
  • 57.87
  • 57.47
  • 57.47
  • 57.12
  • 52.92
  • 52.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.36e4
  • 1.36e4
54.37
  • 54.37
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.50e4
  • 1.50e4
49.79
  • 49.79
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi16 species17 genesCompare expression
Bilateria21 species22 genesCompare expression

Orthology information comes from OMA : ENSDARG00000034174.

Cross-references

EnsemblENSDARG00000034174 (mrrf)
ZFINZDB-GENE-040704-12 (mrrf)
EMBLBX571668
Uniprot/SPTREMBLF1QJ48, F1QJ48_DANRE

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