D. rerio Gene: hs1bp3 - ENSDARG00000034222 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000034222
Namehs1bp3
DescriptionHCLS1 binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-131121-391]
OrganismDanio rerio (zebrafish)
Synonym(s)si:ch1073-80i24.2

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
4.31e3
  • 4.31e3
85.56
  • 85.56
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
5.73e3
  • 5.73e3
80.83
  • 80.83
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
7.26e3
  • 7.26e3
75.70
  • 75.70
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
8.64e3
  • 8.64e3
71.09
  • 71.09
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
9.43e3
  • 9.43e3
68.44
  • 68.44
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
9.54e3
  • 9.54e3
  • 1.14e4
68.05
  • 68.05
  • 61.99
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.03e4
  • 1.03e4
65.37
  • 65.37
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.11e4
  • 1.11e4
62.99
  • 62.99
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.12e4
  • 1.12e4
62.43
  • 62.43
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.13e4
  • 1.13e4
62.13
  • 62.13
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
1.15e4
  • 1.15e4
  • 1.21e4
  • 1.58e4
  • 1.72e4
  • 1.78e4
61.42
  • 61.42
  • 59.33
  • 47.09
  • 42.43
  • 40.27
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.18e4
  • 1.18e4
60.34
  • 60.34
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.20e4
  • 1.20e4
  • 1.42e4
59.72
  • 59.72
  • 52.44
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
1.21e4
  • 1.21e4
  • 1.29e4
59.56
  • 59.56
  • 56.74
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.29e4
  • 1.29e4
56.88
  • 56.88
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.32e4
  • 1.32e4
55.72
  • 55.72
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
1.34e4
  • 1.34e4
55.29
  • 55.29
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.44e4
  • 1.44e4
  • 1.89e4
51.81
  • 51.81
  • 36.69
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.51e4
  • 1.51e4
49.33
  • 49.33
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.58e4
  • 1.58e4
47.05
  • 47.05
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.60e4
  • 1.60e4
46.51
  • 46.51
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.72e4
  • 1.72e4
42.42
  • 42.42
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLCU499333
EnsemblENSDARG00000034222 (hs1bp3)
Uniprot/SPTREMBLF6PCK0, F6PCK0_DANRE
ZFINZDB-GENE-131121-391 (hs1bp3)

Do not show this banner again