D. rerio Gene: ppp5c - ENSDARG00000034313 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000034313
Nameppp5c
Descriptionprotein phosphatase 5, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-050327-75]
OrganismDanio rerio (zebrafish)
Synonym(s)fc83f08, im:7146608, wu:fc83f08, zgc:110801

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
1.34e3
  • 1.34e3
  • 2.20e3
  • 3.67e3
  • 3.70e3
  • 4.60e3
  • 4.95e3
95.52
  • 95.52
  • 92.65
  • 87.70
  • 87.60
  • 84.59
  • 83.43
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
1.51e3
  • 1.51e3
  • 1.70e3
  • 1.96e3
  • 2.16e3
  • 2.51e3
  • 2.61e3
  • 2.65e3
  • 3.55e3
  • 3.78e3
  • 5.30e3
94.94
  • 94.94
  • 94.31
  • 93.43
  • 92.78
  • 91.61
  • 91.26
  • 91.12
  • 88.11
  • 87.35
  • 82.27
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000036Larval:Day 4
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0000106zygote stage
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
1.54e3
  • 1.54e3
  • 2.02e3
  • 2.11e3
  • 2.22e3
  • 2.74e3
  • 2.76e3
  • 2.97e3
  • 3.16e3
  • 3.17e3
  • 3.26e3
  • 3.98e3
  • 4.15e3
  • 5.51e3
  • 8.20e3
  • 1.46e4
  • 1.46e4
94.84
  • 94.84
  • 93.22
  • 92.95
  • 92.57
  • 90.82
  • 90.77
  • 90.05
  • 89.43
  • 89.40
  • 89.08
  • 86.68
  • 86.11
  • 81.54
  • 72.54
  • 51.12
  • 51.01
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.55e3
  • 1.55e3
94.80
  • 94.80
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
2.08e3
  • 2.08e3
  • 3.95e3
  • 4.85e3
  • 5.89e3
  • 6.17e3
93.04
  • 93.04
  • 86.78
  • 83.75
  • 80.29
  • 79.35
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
2.15e3
  • 2.15e3
  • 4.01e3
92.82
  • 92.82
  • 86.58
AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
2.30e3
  • 2.30e3
92.29
  • 92.29
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.40e3
  • 2.40e3
91.97
  • 91.97
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
2.43e3
  • 2.43e3
91.86
  • 91.86
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
2.51e3
  • 2.51e3
  • 4.43e3
91.59
  • 91.59
  • 85.17
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
2.74e3
  • 2.74e3
90.83
  • 90.83
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.75e3
  • 2.75e3
90.81
  • 90.81
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
3.04e3
  • 3.04e3
89.82
  • 89.82
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
3.05e3
  • 3.05e3
89.80
  • 89.80
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
3.30e3
  • 3.30e3
88.97
  • 88.97
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
3.32e3
  • 3.32e3
  • 3.92e3
  • 4.86e3
88.88
  • 88.88
  • 86.89
  • 83.71
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
3.45e3
  • 3.45e3
88.46
  • 88.46
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
3.47e3
  • 3.47e3
  • 4.58e3
88.37
  • 88.37
  • 84.65
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
3.53e3
  • 3.53e3
  • 4.14e3
88.20
  • 88.20
  • 86.15
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
3.57e3
  • 3.57e3
88.04
  • 88.04
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
3.57e3
  • 3.57e3
88.04
  • 88.04
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
3.85e3
  • 3.85e3
  • 4.86e3
  • 5.33e3
  • 5.68e3
87.12
  • 87.12
  • 83.72
  • 82.16
  • 80.98
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
3.90e3
  • 3.90e3
86.93
  • 86.93
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
3.96e3
  • 3.96e3
86.75
  • 86.75
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
4.13e3
  • 4.13e3
86.16
  • 86.16
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
4.14e3
  • 4.14e3
86.15
  • 86.15
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
6.04e3
  • 6.04e3
79.77
  • 79.77
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000018Gastrula:Germ-ring
  • UBERON:0000106zygote stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000015Blastula:Dome
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000026Segmentation:14-19 somites
6.40e3
  • 6.40e3
  • 6.40e3
  • 6.40e3
  • 6.64e3
  • 6.89e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.97e3
  • 8.53e3
  • 8.54e3
  • 8.71e3
  • 8.79e3
  • 8.79e3
  • 8.96e3
  • 8.96e3
  • 9.13e3
  • 9.13e3
  • 9.13e3
  • 9.71e3
  • 9.96e3
  • 9.96e3
78.57
  • 78.57
  • 78.57
  • 78.57
  • 77.77
  • 76.92
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 73.32
  • 71.43
  • 71.41
  • 70.82
  • 70.57
  • 70.57
  • 69.99
  • 69.98
  • 69.43
  • 69.43
  • 69.43
  • 67.48
  • 66.66
  • 66.65
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
6.46e3
  • 6.46e3
78.38
  • 78.38
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
6.81e3
  • 6.81e3
77.20
  • 77.20
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
8.08e3
  • 8.08e3
72.95
  • 72.95
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
9.56e3
  • 9.56e3
67.98
  • 67.98
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.02e4
  • 1.02e4
65.83
  • 65.83
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

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