Gene: si:dkey-88n24.7 - ENSDARG00000034330 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000034330
Name	si:dkey-88n24.7
Description	si:dkey-88n24.7 [Source:ZFIN;Acc:ZDB-GENE-041014-91]
Organism	Danio rerio (zebrafish)
Paralog(s)	44 paralogs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0000206	pharyngeal gill	[+] 1 stage UBERON:0000066fully formed stage	1.38e4 1.38e4	53.92 53.92	AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	1.95e4 1.95e4	34.85 34.85	AEIR AEIR
UBERON:0000948	heart	[+] 1 stage ZFS:0000036Larval:Day 4	2.08e4 2.08e4	30.31 30.31	AEIR AEIR
UBERON:0002548	larva	[+] 2 stages ZFS:0000037Larval:Day 5 UBERON:0000069larval stage	2.27e4 2.27e4 2.67e4	24.10 24.10 10.55	AEIR AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Paralogs (same species)

Taxon name	Gene(s)	Expression comparison	See details
Otophysi	42 genes ENSDARG00000025505 si:ch73-335d12.2 ENSDARG00000041159 si:ch211-63p21.4 ENSDARG00000041389 si:dkey-81n2.1 ENSDARG00000042752 si:ch211-282j17.11 ENSDARG00000043736 si:ch211-282j17.8 ENSDARG00000043767 si:ch211-282j17.3 ENSDARG00000043768 si:ch211-282j17.2 ENSDARG00000053114 si:ch211-272h9.3 ENSDARG00000055332 si:dkey-28d5.11 ENSDARG00000055346 si:dkey-83f18.2 ENSDARG00000070850 si:ch211-282j17.10 ENSDARG00000070851 si:dkey-88n24.6 ENSDARG00000075003 si:dkey-83f18.3 ENSDARG00000075036 si:ch211-225k7.6 ENSDARG00000075634 si:ch211-225k7.4 ENSDARG00000077136 si:dkey-28d5.14 ENSDARG00000077260 si:dkey-28d5.13 ENSDARG00000077395 si:dkey-81n2.2 ENSDARG00000078012 zgc:162060 ENSDARG00000078821 si:ch211-225k7.5 ENSDARG00000086358 si:dkey-83f18.9 ENSDARG00000086460 si:dkey-83f18.10 ENSDARG00000088252 si:dkey-83f18.7 ENSDARG00000088682 si:dkey-192d15.3 ENSDARG00000089067 si:dkey-83f18.5 ENSDARG00000089258 si:ch211-225k7.2 ENSDARG00000089958 si:dkey-88n24.9 ENSDARG00000091095 si:dkey-88n24.8 ENSDARG00000091495 si:dkey-83f18.11 ENSDARG00000092384 si:dkey-28d5.3 ENSDARG00000093312 si:dkey-83f18.4 ENSDARG00000093673 si:dkey-28d5.4 ENSDARG00000093876 si:dkey-28d5.10 ENSDARG00000093909 si:dkey-83f18.15 ENSDARG00000094225 si:dkey-28d5.7 ENSDARG00000094716 si:dkey-83f18.6 ENSDARG00000094750 si:dkey-28d5.5 ENSDARG00000095250 si:ch211-225k7.3 ENSDARG00000095481 si:dkey-28d5.8 ENSDARG00000095757 si:dkey-28d5.1 ENSDARG00000105334 si:dkey-83f18.4 ENSDARG00000105413 si:dkey-83f18.8	Compare expression	[+]
Euteleostomi	44 genes ENSDARG00000025505 si:ch73-335d12.2 ENSDARG00000041159 si:ch211-63p21.4 ENSDARG00000041389 si:dkey-81n2.1 ENSDARG00000042752 si:ch211-282j17.11 ENSDARG00000043736 si:ch211-282j17.8 ENSDARG00000043767 si:ch211-282j17.3 ENSDARG00000043768 si:ch211-282j17.2 ENSDARG00000043769 si:ch211-282j17.1 ENSDARG00000053114 si:ch211-272h9.3 ENSDARG00000055332 si:dkey-28d5.11 ENSDARG00000055346 si:dkey-83f18.2 ENSDARG00000070850 si:ch211-282j17.10 ENSDARG00000070851 si:dkey-88n24.6 ENSDARG00000075003 si:dkey-83f18.3 ENSDARG00000075036 si:ch211-225k7.6 ENSDARG00000075634 si:ch211-225k7.4 ENSDARG00000077136 si:dkey-28d5.14 ENSDARG00000077260 si:dkey-28d5.13 ENSDARG00000077395 si:dkey-81n2.2 ENSDARG00000078012 zgc:162060 ENSDARG00000078821 si:ch211-225k7.5 ENSDARG00000086358 si:dkey-83f18.9 ENSDARG00000086460 si:dkey-83f18.10 ENSDARG00000088252 si:dkey-83f18.7 ENSDARG00000088682 si:dkey-192d15.3 ENSDARG00000089067 si:dkey-83f18.5 ENSDARG00000089258 si:ch211-225k7.2 ENSDARG00000089958 si:dkey-88n24.9 ENSDARG00000091095 si:dkey-88n24.8 ENSDARG00000091495 si:dkey-83f18.11 ENSDARG00000092384 si:dkey-28d5.3 ENSDARG00000093312 si:dkey-83f18.4 ENSDARG00000093595 si:dkey-88n24.10 ENSDARG00000093673 si:dkey-28d5.4 ENSDARG00000093876 si:dkey-28d5.10 ENSDARG00000093909 si:dkey-83f18.15 ENSDARG00000094225 si:dkey-28d5.7 ENSDARG00000094716 si:dkey-83f18.6 ENSDARG00000094750 si:dkey-28d5.5 ENSDARG00000095250 si:ch211-225k7.3 ENSDARG00000095481 si:dkey-28d5.8 ENSDARG00000095757 si:dkey-28d5.1 ENSDARG00000105334 si:dkey-83f18.4 ENSDARG00000105413 si:dkey-83f18.8	Compare expression	[+]

Paralogy information comes from OMA : ENSDARG00000034330.

Cross-references

Ensembl	ENSDARG00000034330 (si:dkey-88n24.7)
ZFIN	ZDB-GENE-041014-91 (si:dkey-88n24.7)
EMBL	BX284672
Uniprot/SPTREMBL	E7F3U7, E7F3U7_DANRE, Q5RIA2, Q5RIA2_DANRE, Q5RIA3, Q5RIA3_DANRE