D. rerio Gene: si:dkey-88n24.7 - ENSDARG00000034330 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000034330
Namesi:dkey-88n24.7
Descriptionsi:dkey-88n24.7 [Source:ZFIN;Acc:ZDB-GENE-041014-91]
OrganismDanio rerio (zebrafish)
Paralog(s)44 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.38e4
  • 1.38e4
53.92
  • 53.92
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.95e4
  • 1.95e4
34.85
  • 34.85
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
2.08e4
  • 2.08e4
30.31
  • 30.31
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
2.27e4
  • 2.27e4
  • 2.67e4
24.10
  • 24.10
  • 10.55
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Otophysi42 genesCompare expression
Euteleostomi44 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000034330.

Cross-references

EnsemblENSDARG00000034330 (si:dkey-88n24.7)
ZFINZDB-GENE-041014-91 (si:dkey-88n24.7)
EMBLBX284672
Uniprot/SPTREMBLE7F3U7, E7F3U7_DANRE, Q5RIA2, Q5RIA2_DANRE, Q5RIA3, Q5RIA3_DANRE

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