D. rerio Gene: zgc:173443 - ENSDARG00000034403 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000034403
Namezgc:173443
Descriptionzgc:173443 [Source:ZFIN;Acc:ZDB-GENE-071004-101]
OrganismDanio rerio (zebrafish)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
233
  • 233
99.22
  • 99.22
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
481
  • 481
98.39
  • 98.39
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
538
  • 538
98.20
  • 98.20
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
808
  • 808
97.30
  • 97.30
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
848
  • 848
97.16
  • 97.16
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.24e3
  • 1.24e3
95.85
  • 95.85
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.24e3
  • 2.24e3
92.50
  • 92.50
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
3.10e3
  • 3.10e3
89.64
  • 89.64
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
4.91e3
  • 4.91e3
83.56
  • 83.56
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
6.83e3
  • 6.83e3
77.12
  • 77.12
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
6.93e3
  • 6.93e3
76.81
  • 76.81
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
7.00e3
  • 7.00e3
  • 8.73e3
76.55
  • 76.55
  • 70.76
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
7.05e3
  • 7.05e3
76.40
  • 76.40
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
8.97e3
  • 8.97e3
69.96
  • 69.96
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.12e4
  • 1.12e4
62.56
  • 62.56
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.12e4
  • 1.12e4
62.53
  • 62.53
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
1.13e4
  • 1.13e4
  • 1.56e4
  • 1.73e4
  • 1.76e4
  • 1.77e4
62.28
  • 62.28
  • 47.83
  • 42.20
  • 41.20
  • 40.66
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
1.24e4
  • 1.24e4
  • 1.36e4
58.56
  • 58.56
  • 54.53
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.29e4
  • 1.29e4
56.96
  • 56.96
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
1.40e4
  • 1.40e4
  • 1.47e4
52.99
  • 52.99
  • 50.86
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.60e4
  • 1.60e4
46.47
  • 46.47
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.79e4
  • 1.79e4
  • 2.34e4
40.19
  • 40.19
  • 21.62
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.94e4
  • 1.94e4
35.18
  • 35.18
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
2.34e4
  • 2.34e4
21.49
  • 21.49
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSDARG00000034403 (zgc:173443)
Uniprot/SPTREMBLF1QSA0, F1QSA0_DANRE
ZFINZDB-GENE-071004-101 (zgc:173443)

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