D. rerio Gene: hn1l - ENSDARG00000034427 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000034427
Namehn1l
Descriptionhematological and neurological expressed 1-like [Source:ZFIN;Acc:ZDB-GENE-030131-599]
OrganismDanio rerio (zebrafish)
Synonym(s)fc04g11, wu:fb37f03, wu:fc04g11, zgc:55712

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000009Blastula:256-cell
173
  • 173
  • 418
  • 461
  • 594
  • 694
99.43
  • 99.43
  • 98.60
  • 98.46
  • 98.01
  • 97.68
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
308
  • 308
98.97
  • 98.97
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
384
  • 384
98.72
  • 98.72
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
  • ZFS:0000049segmentation
431
  • 431
  • 858
  • 908
  • 943
  • 957
  • 1.00e3
  • 1.01e3
  • 1.10e3
  • 1.15e3
  • 1.31e3
  • 1.62e3
  • 1.64e3
  • 1.68e3
  • 3.45e3
  • 1.29e4
  • 1.38e4
  • 1.44e4
  • 1.49e4
98.56
  • 98.56
  • 97.13
  • 96.96
  • 96.84
  • 96.80
  • 96.66
  • 96.61
  • 96.34
  • 96.16
  • 95.61
  • 94.59
  • 94.51
  • 94.37
  • 88.46
  • 56.79
  • 53.85
  • 51.82
  • 49.95
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
661
  • 661
  • 1.47e4
97.79
  • 97.79
  • 50.63
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • UBERON:0000068embryo stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
664
  • 664
  • 829
  • 895
  • 1.12e3
  • 1.29e3
  • 1.41e3
  • 1.43e3
  • 1.60e3
  • 2.13e3
  • 2.20e3
97.78
  • 97.78
  • 97.23
  • 97.00
  • 96.25
  • 95.68
  • 95.28
  • 95.21
  • 94.66
  • 92.89
  • 92.64
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
724
  • 724
  • 727
  • 965
  • 1.10e3
  • 1.20e3
  • 1.62e3
97.58
  • 97.58
  • 97.57
  • 96.77
  • 96.33
  • 95.99
  • 94.58
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
773
  • 773
97.41
  • 97.41
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
780
  • 780
97.39
  • 97.39
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
917
  • 917
  • 1.07e3
96.93
  • 96.93
  • 96.42
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
941
  • 941
  • 2.07e3
96.85
  • 96.85
  • 93.06
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
970
  • 970
96.76
  • 96.76
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.03e3
  • 1.03e3
96.56
  • 96.56
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.06e3
  • 1.06e3
96.47
  • 96.47
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.12e3
  • 1.12e3
96.25
  • 96.25
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.24e3
  • 1.24e3
95.86
  • 95.86
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.27e3
  • 1.27e3
95.77
  • 95.77
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.28e3
  • 1.28e3
95.70
  • 95.70
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.29e3
  • 1.29e3
95.70
  • 95.70
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.30e3
  • 1.30e3
95.65
  • 95.65
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.30e3
  • 1.30e3
95.64
  • 95.64
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.35e3
  • 1.35e3
95.47
  • 95.47
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.42e3
  • 1.42e3
95.26
  • 95.26
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000032Pharyngula:High-pec
1.45e3
  • 1.45e3
  • 2.33e3
  • 2.38e3
  • 6.49e3
  • 1.20e4
95.15
  • 95.15
  • 92.19
  • 92.04
  • 78.26
  • 59.98
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
1.53e3
  • 1.53e3
  • 1.63e3
  • 2.13e3
94.89
  • 94.89
  • 94.55
  • 92.88
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.61e3
  • 1.61e3
94.61
  • 94.61
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.72e3
  • 1.72e3
94.23
  • 94.23
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.73e3
  • 1.73e3
94.20
  • 94.20
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
1.86e3
  • 1.86e3
  • 1.50e4
93.79
  • 93.79
  • 49.92
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
1.92e3
  • 1.92e3
  • 4.55e3
93.58
  • 93.58
  • 84.78
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.13e3
  • 2.13e3
92.88
  • 92.88
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
2.30e3
  • 2.30e3
92.29
  • 92.29
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
2.32e3
  • 2.32e3
  • 2.46e3
92.25
  • 92.25
  • 91.77
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
2.33e3
  • 2.33e3
92.19
  • 92.19
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
4.98e3
  • 4.98e3
  • 7.97e3
  • 8.71e3
  • 9.96e3
  • 1.08e4
83.33
  • 83.33
  • 73.32
  • 70.82
  • 66.65
  • 63.87
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
ZFA:0000093blastomere (Danio)
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • UBERON:00072322 cell stage
7.47e3
  • 7.47e3
  • 7.47e3
  • 9.96e3
75.00
  • 75.00
  • 75.00
  • 66.67
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002328notochord
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
9.51e3
  • 9.51e3
  • 1.20e4
  • 1.20e4
  • 1.22e4
68.16
  • 68.16
  • 59.98
  • 59.97
  • 59.06
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003053ventricular zone
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
1.03e4
  • 1.03e4
  • 1.12e4
65.37
  • 65.37
  • 62.49
AEIR
  • AEIR
  • AEIR
UBERON:0003063prechordal plate
  • ZFS:0000022Gastrula:Bud
1.07e4
  • 1.07e4
64.28
  • 64.28
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000066fully formed stage
1.09e4
  • 1.09e4
  • 1.12e4
  • 1.34e4
  • 1.50e4
63.63
  • 63.63
  • 62.49
  • 55.16
  • 49.94
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001890forebrain
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
1.10e4
  • 1.10e4
  • 1.17e4
63.32
  • 63.32
  • 60.70
AEIR
  • AEIR
  • AEIR
ZFA:0000092axis (Danio)
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000021Gastrula:90%-epiboly
1.16e4
  • 1.16e4
  • 1.16e4
  • 1.16e4
  • 1.23e4
  • 1.23e4
  • 1.23e4
61.09
  • 61.09
  • 61.09
  • 61.09
  • 58.80
  • 58.80
  • 58.80
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001017central nervous system
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
1.17e4
  • 1.17e4
  • 1.20e4
60.70
  • 60.70
  • 59.98
AEIR
  • AEIR
  • AEIR
UBERON:0002540lateral line system
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
1.17e4
  • 1.17e4
  • 1.17e4
60.70
  • 60.70
  • 60.70
AEIR
  • AEIR
  • AEIR
UBERON:0001945superior colliculus
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
1.18e4
  • 1.18e4
  • 1.23e4
60.50
  • 60.50
  • 58.80
AEIR
  • AEIR
  • AEIR
UBERON:0007269pectoral appendage musculature
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
1.18e4
  • 1.18e4
  • 1.18e4
60.50
  • 60.50
  • 60.50
AEIR
  • AEIR
  • AEIR
UBERON:0005886post-hyoid pharyngeal arch skeleton
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
1.23e4
  • 1.23e4
  • 1.23e4
  • 1.26e4
  • 1.26e4
58.80
  • 58.80
  • 58.80
  • 57.87
  • 57.87
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLBX914211, BX936333
EnsemblENSDARG00000034427 (hn1l)
Uniprot/SPTREMBLF1Q6E4, F1Q6E4_DANRE
ZFINZDB-GENE-030131-599 (hn1l)

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