D. rerio Gene: scn4ab - ENSDARG00000034588 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000034588
Namescn4ab
Descriptionsodium channel, voltage-gated, type IV, alpha, b [Source:ZFIN;Acc:ZDB-GENE-051201-1]
OrganismDanio rerio (zebrafish)
Synonym(s)na<sub>v</sub>1.4b, nav1.4b, q2xvr2, zscn5

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
982
  • 982
96.72
  • 96.72
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.25e3
  • 1.25e3
95.81
  • 95.81
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
3.24e3
  • 3.24e3
89.16
  • 89.16
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
4.20e3
  • 4.20e3
85.93
  • 85.93
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
5.46e3
  • 5.46e3
  • 1.87e4
81.73
  • 81.73
  • 37.50
AEIR
  • AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • UBERON:00072322 cell stage
6.40e3
  • 6.40e3
78.57
  • 78.57
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
7.13e3
  • 7.13e3
76.14
  • 76.14
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
8.57e3
  • 8.57e3
  • 1.84e4
71.31
  • 71.31
  • 38.42
AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000029Pharyngula:Prim-5
9.96e3
  • 9.96e3
  • 1.37e4
66.67
  • 66.67
  • 54.13
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.06e4
  • 1.06e4
64.44
  • 64.44
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
1.10e4
  • 1.10e4
  • 1.59e4
  • 1.68e4
  • 1.78e4
  • 1.78e4
  • 1.87e4
63.17
  • 63.17
  • 46.64
  • 43.86
  • 40.54
  • 40.42
  • 37.27
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.15e4
  • 1.15e4
61.38
  • 61.38
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
1.18e4
  • 1.18e4
  • 1.66e4
  • 1.76e4
60.59
  • 60.59
  • 44.28
  • 41.12
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.21e4
  • 1.21e4
59.40
  • 59.40
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
1.22e4
  • 1.22e4
58.99
  • 58.99
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.23e4
  • 1.23e4
58.80
  • 58.80
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.31e4
  • 1.31e4
56.13
  • 56.13
AEIR
  • AEIR
UBERON:0000926mesoderm
  • ZFS:0000022Gastrula:Bud
1.38e4
  • 1.38e4
53.83
  • 53.83
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000104life cycle
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000106zygote stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000040Larval:Days 14-20
1.50e4
  • 1.50e4
  • 1.54e4
  • 1.68e4
  • 1.76e4
  • 1.78e4
  • 1.79e4
  • 1.80e4
  • 1.81e4
  • 1.83e4
49.92
  • 49.92
  • 48.32
  • 43.66
  • 41.01
  • 40.56
  • 40.18
  • 39.77
  • 39.42
  • 38.72
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.57e4
  • 1.57e4
47.44
  • 47.44
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.65e4
  • 1.65e4
44.68
  • 44.68
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
1.69e4
  • 1.69e4
43.38
  • 43.38
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.70e4
  • 1.70e4
43.23
  • 43.23
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
1.82e4
  • 1.82e4
39.00
  • 39.00
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.91e4
  • 1.91e4
35.97
  • 35.97
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.02e4
  • 2.02e4
32.25
  • 32.25
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLBC163558, BX005440, DQ149505, DQ221254
EnsemblENSDARG00000034588 (scn4ab)
Uniprot/SPTREMBLE9QB13, E9QB13_DANRE
Uniprot/SWISSPROTQ20JQ7, SC4AB_DANRE
ZFINZDB-GENE-051201-1 (scn4ab)

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