D. rerio Gene: nuf2 - ENSDARG00000034624 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000034624
Namenuf2
DescriptionNUF2, NDC80 kinetochore complex component, homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1121]
OrganismDanio rerio (zebrafish)
Synonym(s)cdca1, un-named hi2769, unm hi2769, zgc:56708

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.22e3
  • 1.22e3
95.93
  • 95.93
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
1.24e3
  • 1.24e3
  • 1.50e4
95.87
  • 95.87
  • 49.89
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.29e3
  • 1.29e3
95.69
  • 95.69
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
1.57e3
  • 1.57e3
  • 2.57e3
  • 2.77e3
  • 2.85e3
  • 3.97e3
  • 7.17e3
94.75
  • 94.75
  • 91.39
  • 90.73
  • 90.46
  • 86.71
  • 75.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000037Larval:Day 5
  • ZFS:0000024Segmentation:5-9 somites
1.96e3
  • 1.96e3
  • 3.14e3
  • 4.12e3
  • 4.19e3
  • 4.46e3
  • 6.46e3
  • 6.49e3
  • 6.51e3
  • 7.19e3
  • 7.78e3
93.43
  • 93.43
  • 89.51
  • 86.21
  • 85.96
  • 85.08
  • 78.37
  • 78.27
  • 78.21
  • 75.92
  • 73.96
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
2.35e3
  • 2.35e3
  • 3.35e3
  • 8.63e3
  • 1.65e4
92.13
  • 92.13
  • 88.80
  • 71.09
  • 44.78
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.75e3
  • 2.75e3
90.80
  • 90.80
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
2.83e3
  • 2.83e3
  • 3.42e3
  • 6.21e3
  • 6.28e3
  • 8.19e3
90.52
  • 90.52
  • 88.54
  • 79.22
  • 78.97
  • 72.57
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
2.94e3
  • 2.94e3
90.16
  • 90.16
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
3.17e3
  • 3.17e3
89.38
  • 89.38
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
3.93e3
  • 3.93e3
  • 1.52e4
86.85
  • 86.85
  • 48.97
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
4.00e3
  • 4.00e3
86.62
  • 86.62
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000106zygote stage
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
  • ZFS:0000040Larval:Days 14-20
  • UBERON:0000068embryo stage
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
4.15e3
  • 4.15e3
  • 4.60e3
  • 5.17e3
  • 5.22e3
  • 5.62e3
  • 5.82e3
  • 6.07e3
  • 6.08e3
  • 7.47e3
  • 7.47e3
  • 7.70e3
  • 7.91e3
  • 8.79e3
  • 9.56e3
  • 1.03e4
  • 1.08e4
  • 1.10e4
  • 1.21e4
  • 1.41e4
  • 1.42e4
  • 1.47e4
86.11
  • 86.11
  • 84.59
  • 82.69
  • 82.51
  • 81.19
  • 80.53
  • 79.67
  • 79.63
  • 74.99
  • 74.99
  • 74.21
  • 73.52
  • 70.57
  • 67.99
  • 65.38
  • 63.99
  • 63.30
  • 59.40
  • 52.63
  • 52.43
  • 50.90
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
4.56e3
  • 4.56e3
  • 2.21e4
84.75
  • 84.75
  • 26.03
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
4.62e3
  • 4.62e3
84.52
  • 84.52
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
5.14e3
  • 5.14e3
82.78
  • 82.78
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
5.25e3
  • 5.25e3
82.44
  • 82.44
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
5.26e3
  • 5.26e3
82.39
  • 82.39
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
5.58e3
  • 5.58e3
  • 1.40e4
81.31
  • 81.31
  • 53.11
AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
8.20e3
  • 8.20e3
72.55
  • 72.55
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
8.45e3
  • 8.45e3
71.72
  • 71.72
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
8.52e3
  • 8.52e3
71.49
  • 71.49
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
8.81e3
  • 8.81e3
70.50
  • 70.50
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
9.55e3
  • 9.55e3
68.02
  • 68.02
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
9.84e3
  • 9.84e3
67.05
  • 67.05
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
1.01e4
  • 1.01e4
  • 1.32e4
66.22
  • 66.22
  • 55.85
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
1.02e4
  • 1.02e4
  • 1.05e4
  • 1.32e4
65.91
  • 65.91
  • 64.92
  • 55.79
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.09e4
  • 1.09e4
63.47
  • 63.47
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.11e4
  • 1.11e4
62.90
  • 62.90
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.15e4
  • 1.15e4
61.35
  • 61.35
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.20e4
  • 1.20e4
59.79
  • 59.79
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
1.30e4
  • 1.30e4
56.48
  • 56.48
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.40e4
  • 1.40e4
53.08
  • 53.08
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.74e4
  • 1.74e4
41.75
  • 41.75
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLBC050181, CR855375
EnsemblENSDARG00000034624 (nuf2)
Uniprot/SPTREMBLE9QBK4, E9QBK4_DANRE, E9QD03, E9QD03_DANRE
Uniprot/SWISSPROTNUF2_DANRE, Q7ZW63
ZFINZDB-GENE-040426-1121 (nuf2)

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