D. rerio Gene: vegfab - ENSDARG00000034700 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000034700
Namevegfab
Descriptionvascular endothelial growth factor Ab [Source:ZFIN;Acc:ZDB-GENE-030131-4605]
OrganismDanio rerio (zebrafish)
Synonym(s)fd42e02, si:dkey-14d8.3, wu:fd42e02
Orthologs(s)10 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.04e3
  • 1.04e3
  • 4.37e3
96.51
  • 96.51
  • 85.39
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000025Segmentation:10-13 somites
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
1.10e3
  • 1.10e3
  • 6.54e3
  • 1.49e4
  • 1.50e4
96.32
  • 96.32
  • 78.12
  • 50.25
  • 49.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.44e3
  • 1.44e3
95.20
  • 95.20
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.53e3
  • 1.53e3
94.87
  • 94.87
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
2.56e3
  • 2.56e3
91.42
  • 91.42
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
3.20e3
  • 3.20e3
89.28
  • 89.28
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
3.63e3
  • 3.63e3
87.86
  • 87.86
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
4.10e3
  • 4.10e3
86.28
  • 86.28
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000029Pharyngula:Prim-5
4.42e3
  • 4.42e3
  • 1.34e4
85.20
  • 85.20
  • 54.99
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
4.60e3
  • 4.60e3
84.62
  • 84.62
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
5.05e3
  • 5.05e3
83.11
  • 83.11
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
5.50e3
  • 5.50e3
  • 1.15e4
81.60
  • 81.60
  • 61.37
AEIR
  • AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000036Larval:Day 4
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000035Larval:Protruding-mouth
5.97e3
  • 5.97e3
  • 1.29e4
  • 1.34e4
80.00
  • 80.00
  • 56.65
  • 55.16
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
7.72e3
  • 7.72e3
74.16
  • 74.16
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
8.32e3
  • 8.32e3
  • 9.41e3
  • 9.71e3
  • 1.08e4
  • 1.15e4
72.14
  • 72.14
  • 68.50
  • 67.48
  • 63.98
  • 61.49
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
8.38e3
  • 8.38e3
  • 8.93e3
71.96
  • 71.96
  • 70.10
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
8.47e3
  • 8.47e3
71.64
  • 71.64
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
8.54e3
  • 8.54e3
71.39
  • 71.39
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
9.53e3
  • 9.53e3
68.10
  • 68.10
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
9.94e3
  • 9.94e3
66.72
  • 66.72
AEIR
  • AEIR
UBERON:0004739pronephric glomerulus
  • ZFS:0000036Larval:Day 4
  • ZFS:0000033Hatching:Long-pec
9.96e3
  • 9.96e3
  • 1.28e4
66.67
  • 66.67
  • 57.14
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.11e4
  • 1.11e4
62.91
  • 62.91
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
1.23e4
  • 1.23e4
58.97
  • 58.97
AEIR
  • AEIR
UBERON:2001073axial vasculature
  • ZFS:0000033Hatching:Long-pec
1.24e4
  • 1.24e4
58.33
  • 58.33
AEIR
  • AEIR
UBERON:0002028hindbrain
  • ZFS:0000031Pharyngula:Prim-25
1.30e4
  • 1.30e4
56.49
  • 56.49
AEIR
  • AEIR
UBERON:0004537blood vasculature
  • ZFS:0000036Larval:Day 4
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
1.67e4
  • 1.67e4
  • 1.69e4
43.95
  • 43.95
  • 43.42
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.71e4
  • 1.71e4
42.76
  • 42.76
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Orthologs

Cross-references

EnsemblENSDARG00000034700 (vegfab)
ZFINZDB-GENE-030131-4605 (vegfab)
EMBLBX324164
Uniprot/SPTREMBLF1QDN7, F1QDN7_DANRE, F1QTG5, F1QTG5_DANRE, Q1ANK8, Q1ANK8_DANRE, Q5RHW5, Q5RHW5_DANRE

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