D. rerio Gene: ftr85 - ENSDARG00000034707 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000034707
Nameftr85
DescriptionfinTRIM family, member 85 [Source:ZFIN;Acc:ZDB-GENE-070705-22]
OrganismDanio rerio (zebrafish)
Synonym(s)si:ch211-121a2.3
Orthologs(s)1 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.32e4
  • 1.32e4
55.95
  • 55.95
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.38e4
  • 1.38e4
53.80
  • 53.80
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.51e4
  • 1.51e4
49.37
  • 49.37
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.59e4
  • 1.59e4
  • 1.96e4
46.81
  • 46.81
  • 34.51
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.90e4
  • 1.90e4
36.25
  • 36.25
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.95e4
  • 1.95e4
  • 2.09e4
34.68
  • 34.68
  • 30.12
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
1.96e4
  • 1.96e4
  • 1.97e4
  • 2.02e4
  • 2.07e4
  • 2.10e4
34.53
  • 34.53
  • 33.96
  • 32.26
  • 30.67
  • 29.78
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
2.09e4
  • 2.09e4
29.95
  • 29.95
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.15e4
  • 2.15e4
28.12
  • 28.12
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.20e4
  • 2.20e4
26.38
  • 26.38
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi1 species1 geneCompare expression

Orthology information comes from OMA : ENSDARG00000034707.

Cross-references

EnsemblENSDARG00000034707 (ftr85)
ZFINZDB-GENE-070705-22 (ftr85)
EMBLBX511260
Uniprot/SPTREMBLA8E7M3, A8E7M3_DANRE

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