D. rerio Gene: rarab - ENSDARG00000034893 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000034893
Namerarab
Descriptionretinoic acid receptor, alpha b [Source:ZFIN;Acc:ZDB-GENE-980526-72]
OrganismDanio rerio (zebrafish)
Synonym(s)fj66e06, nr1b1-b, nr1b1b, q90272, rara2b, raralpha-b, wu:fj66e06, zrar-alpha-2.b

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
963
  • 963
  • 4.98e3
  • 7.15e3
  • 8.14e3
  • 8.22e3
  • 9.53e3
  • 1.36e4
96.78
  • 96.78
  • 83.33
  • 76.07
  • 72.73
  • 72.48
  • 68.10
  • 54.55
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000016Blastula:30%-epiboly
1.14e3
  • 1.14e3
  • 2.26e3
  • 4.76e3
  • 5.34e3
  • 5.93e3
96.19
  • 96.19
  • 92.45
  • 84.05
  • 82.12
  • 80.15
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2007029hindbrain neural keel
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000025Segmentation:10-13 somites
1.87e3
  • 1.87e3
  • 2.13e3
  • 2.13e3
93.75
  • 93.75
  • 92.86
  • 92.86
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2007034forebrain neural rod
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
1.87e3
  • 1.87e3
  • 2.49e3
  • 2.99e3
93.75
  • 93.75
  • 91.67
  • 90.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
2.03e3
  • 2.03e3
93.20
  • 93.20
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
2.10e3
  • 2.10e3
92.99
  • 92.99
AEIR
  • AEIR
UBERON:0001792ganglionic layer of retina
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
2.13e3
  • 2.13e3
  • 7.97e3
  • 9.96e3
92.86
  • 92.86
  • 73.32
  • 66.66
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009614hindbrain neural plate
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
2.13e3
  • 2.13e3
  • 2.30e3
  • 2.30e3
92.86
  • 92.86
  • 92.31
  • 92.31
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
2.14e3
  • 2.14e3
92.85
  • 92.85
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000017Gastrula:50%-epiboly
2.51e3
  • 2.51e3
  • 2.89e3
  • 5.33e3
  • 5.78e3
  • 6.86e3
  • 6.89e3
91.59
  • 91.59
  • 90.33
  • 82.15
  • 80.65
  • 77.04
  • 76.93
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2000083ventral mesoderm
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
2.99e3
  • 2.99e3
  • 2.99e3
  • 3.20e3
  • 4.39e3
90.00
  • 90.00
  • 90.00
  • 89.28
  • 85.29
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2007026forebrain neural keel
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
3.20e3
  • 3.20e3
  • 3.45e3
  • 3.45e3
89.28
  • 89.28
  • 88.46
  • 88.46
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
3.41e3
  • 3.41e3
88.59
  • 88.59
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
3.72e3
  • 3.72e3
87.54
  • 87.54
AEIR
  • AEIR
UBERON:0001945superior colliculus
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
3.73e3
  • 3.73e3
  • 7.86e3
  • 7.91e3
  • 9.13e3
  • 9.13e3
87.50
  • 87.50
  • 73.67
  • 73.52
  • 69.43
  • 69.43
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001049neural tube
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
3.74e3
  • 3.74e3
  • 1.30e4
87.49
  • 87.49
  • 56.49
AEIR
  • AEIR
  • AEIR
UBERON:0002028hindbrain
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000029Pharyngula:Prim-5
3.74e3
  • 3.74e3
  • 4.27e3
  • 7.47e3
  • 8.96e3
  • 9.10e3
  • 9.44e3
  • 1.07e4
87.49
  • 87.49
  • 85.71
  • 74.99
  • 69.98
  • 69.55
  • 68.40
  • 64.26
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
3.92e3
  • 3.92e3
86.88
  • 86.88
AEIR
  • AEIR
UBERON:0001894diencephalon
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
4.15e3
  • 4.15e3
  • 9.10e3
  • 9.51e3
  • 1.31e4
  • 1.41e4
86.11
  • 86.11
  • 69.55
  • 68.16
  • 56.22
  • 52.75
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
4.15e3
  • 4.15e3
  • 4.83e3
  • 5.02e3
  • 5.77e3
  • 5.81e3
  • 5.91e3
  • 7.12e3
  • 7.24e3
  • 8.49e3
  • 1.09e4
86.09
  • 86.09
  • 83.82
  • 83.20
  • 80.69
  • 80.56
  • 80.22
  • 76.17
  • 75.75
  • 71.56
  • 63.66
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001017central nervous system
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000026Segmentation:14-19 somites
4.27e3
  • 4.27e3
  • 4.98e3
  • 9.19e3
  • 9.60e3
  • 1.02e4
  • 1.05e4
  • 1.05e4
  • 1.07e4
85.71
  • 85.71
  • 83.33
  • 69.22
  • 67.85
  • 65.77
  • 64.69
  • 64.69
  • 64.27
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001892rhombomere
  • ZFS:0000026Segmentation:14-19 somites
4.27e3
  • 4.27e3
85.71
  • 85.71
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000023Segmentation:1-4 somites
4.56e3
  • 4.56e3
  • 1.09e4
  • 1.21e4
84.74
  • 84.74
  • 63.61
  • 59.50
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003075neural plate
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
4.72e3
  • 4.72e3
  • 4.72e3
  • 4.98e3
  • 1.03e4
  • 1.10e4
  • 1.15e4
  • 1.15e4
  • 1.15e4
  • 1.15e4
84.20
  • 84.20
  • 84.20
  • 83.32
  • 65.37
  • 63.32
  • 61.53
  • 61.53
  • 61.53
  • 61.53
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
5.14e3
  • 5.14e3
82.80
  • 82.80
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
5.18e3
  • 5.18e3
82.67
  • 82.67
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000106zygote stage
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000042Juvenile:Days 30-44
5.30e3
  • 5.30e3
  • 5.40e3
  • 5.54e3
  • 5.66e3
  • 6.57e3
  • 6.78e3
  • 7.03e3
  • 7.30e3
  • 7.91e3
  • 1.00e4
  • 1.06e4
  • 1.07e4
  • 1.14e4
  • 1.15e4
  • 1.26e4
  • 1.28e4
82.27
  • 82.27
  • 81.91
  • 81.44
  • 81.06
  • 78.00
  • 77.29
  • 76.46
  • 75.55
  • 73.52
  • 66.48
  • 64.62
  • 64.07
  • 61.95
  • 61.35
  • 57.91
  • 57.17
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001791inner nuclear layer of retina
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
5.43e3
  • 5.43e3
  • 1.09e4
  • 1.12e4
81.81
  • 81.81
  • 63.63
  • 62.49
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
5.46e3
  • 5.46e3
81.72
  • 81.72
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
5.59e3
  • 5.59e3
81.30
  • 81.30
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
5.66e3
  • 5.66e3
81.04
  • 81.04
AEIR
  • AEIR
UBERON:0007293presumptive rhombomere 6
  • ZFS:0000024Segmentation:5-9 somites
5.97e3
  • 5.97e3
80.00
  • 80.00
AEIR
  • AEIR
UBERON:0002533post-anal tail bud
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000021Gastrula:90%-epiboly
6.29e3
  • 6.29e3
  • 1.28e4
  • 1.33e4
  • 1.33e4
  • 1.41e4
  • 1.49e4
78.94
  • 78.94
  • 57.14
  • 55.53
  • 55.53
  • 52.75
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
6.37e3
  • 6.37e3
  • 1.09e4
  • 1.14e4
78.68
  • 78.68
  • 63.66
  • 61.73
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
6.64e3
  • 6.64e3
  • 6.89e3
  • 8.54e3
  • 8.79e3
  • 8.96e3
  • 9.13e3
  • 9.13e3
77.77
  • 77.77
  • 76.92
  • 71.41
  • 70.57
  • 69.98
  • 69.43
  • 69.43
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
6.71e3
  • 6.71e3
77.53
  • 77.53
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
7.09e3
  • 7.09e3
  • 1.21e4
76.25
  • 76.25
  • 59.54
AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
7.33e3
  • 7.33e3
75.45
  • 75.45
AEIR
  • AEIR
UBERON:0008781blastodisc derived epiblast
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000023Segmentation:1-4 somites
7.47e3
  • 7.47e3
  • 9.96e3
  • 1.49e4
  • 1.49e4
75.00
  • 75.00
  • 66.67
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000151pectoral fin
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
7.47e3
  • 7.47e3
  • 7.97e3
  • 1.03e4
74.99
  • 74.99
  • 73.32
  • 65.61
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
7.65e3
  • 7.65e3
74.39
  • 74.39
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
7.80e3
  • 7.80e3
73.88
  • 73.88
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
7.95e3
  • 7.95e3
73.39
  • 73.39
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
8.00e3
  • 8.00e3
73.22
  • 73.22
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
8.36e3
  • 8.36e3
72.01
  • 72.01
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
8.39e3
  • 8.39e3
71.90
  • 71.90
AEIR
  • AEIR
UBERON:0002539pharyngeal arch
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000026Segmentation:14-19 somites
8.40e3
  • 8.40e3
  • 8.79e3
  • 9.19e3
  • 1.03e4
  • 1.09e4
71.86
  • 71.86
  • 70.57
  • 69.22
  • 65.61
  • 63.63
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000029Pharyngula:Prim-5
8.83e3
  • 8.83e3
  • 9.51e3
  • 1.02e4
  • 1.05e4
  • 1.28e4
70.44
  • 70.44
  • 68.16
  • 65.77
  • 64.69
  • 57.11
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000031Pharyngula:Prim-25
8.94e3
  • 8.94e3
  • 1.09e4
  • 1.12e4
  • 1.13e4
70.08
  • 70.08
  • 63.63
  • 62.49
  • 62.21
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001890forebrain
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000026Segmentation:14-19 somites
9.19e3
  • 9.19e3
  • 1.03e4
  • 1.29e4
  • 1.39e4
69.22
  • 69.22
  • 65.37
  • 56.65
  • 53.31
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
9.36e3
  • 9.36e3
  • 1.19e4
68.65
  • 68.65
  • 60.21
AEIR
  • AEIR
  • AEIR
UBERON:0004750blastoderm
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000019Gastrula:Shield
9.96e3
  • 9.96e3
  • 1.49e4
  • 1.49e4
66.67
  • 66.67
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005068neural rod
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
9.96e3
  • 9.96e3
  • 1.26e4
  • 1.49e4
66.67
  • 66.67
  • 57.68
  • 49.99
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.12e4
  • 1.12e4
62.58
  • 62.58
AEIR
  • AEIR
UBERON:0003081lateral plate mesoderm
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
1.12e4
  • 1.12e4
  • 1.28e4
62.50
  • 62.50
  • 57.14
AEIR
  • AEIR
  • AEIR
UBERON:0003351pharyngeal epithelium
  • ZFS:0000033Hatching:Long-pec
1.12e4
  • 1.12e4
62.50
  • 62.50
AEIR
  • AEIR
UBERON:0005519rhombomere 6
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
1.12e4
  • 1.12e4
  • 1.24e4
62.50
  • 62.50
  • 58.33
AEIR
  • AEIR
  • AEIR
UBERON:0007292presumptive rhombomere 5
  • ZFS:0000024Segmentation:5-9 somites
1.12e4
  • 1.12e4
62.50
  • 62.50
AEIR
  • AEIR
UBERON:0000925endoderm
  • ZFS:0000022Gastrula:Bud
1.12e4
  • 1.12e4
62.49
  • 62.49
AEIR
  • AEIR
UBERON:0010312immature eye
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000026Segmentation:14-19 somites
1.14e4
  • 1.14e4
  • 1.26e4
  • 1.32e4
  • 1.33e4
61.88
  • 61.88
  • 57.87
  • 55.86
  • 55.53
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.22e4
  • 1.22e4
59.23
  • 59.23
AEIR
  • AEIR
UBERON:0005515rhombomere 5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
1.24e4
  • 1.24e4
  • 1.28e4
58.33
  • 58.33
  • 57.14
AEIR
  • AEIR
  • AEIR
UBERON:0007690early pharyngeal endoderm
  • ZFS:0000029Pharyngula:Prim-5
1.24e4
  • 1.24e4
58.33
  • 58.33
AEIR
  • AEIR
UBERON:0000924ectoderm
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
1.24e4
  • 1.24e4
  • 1.37e4
58.32
  • 58.32
  • 54.15
AEIR
  • AEIR
  • AEIR
UBERON:0004879marginal zone of embryo
  • ZFS:0000020Gastrula:75%-epiboly
1.26e4
  • 1.26e4
57.87
  • 57.87
AEIR
  • AEIR
UBERON:0000926mesoderm
  • ZFS:0000022Gastrula:Bud
1.26e4
  • 1.26e4
57.68
  • 57.68
AEIR
  • AEIR
UBERON:0009910posterior lateral plate mesoderm
  • ZFS:0000024Segmentation:5-9 somites
1.28e4
  • 1.28e4
57.14
  • 57.14
AEIR
  • AEIR
UBERON:0003051ear vesicle
  • ZFS:0000029Pharyngula:Prim-5
1.35e4
  • 1.35e4
54.96
  • 54.96
AEIR
  • AEIR
UBERON:0006222future diencephalon
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
1.37e4
  • 1.37e4
  • 1.49e4
  • 1.49e4
54.15
  • 54.15
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000089hypoblast (generic)
  • ZFS:0000020Gastrula:75%-epiboly
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0007277presumptive hindbrain
  • ZFS:0000020Gastrula:75%-epiboly
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLBC049301, CR392003, KF030797, L03399
EnsemblENSDARG00000034893 (rarab)
Uniprot/SPTREMBLE7EZ95, E7EZ95_DANRE
Uniprot/SWISSPROTQ7ZTI3, RARAB_DANRE
ZFINZDB-GENE-980526-72 (rarab)

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