D. rerio Gene: retsatl - ENSDARG00000034989 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000034989
Nameretsatl
Descriptionretinol saturase (all-trans-retinol 13,14-reductase) like [Source:ZFIN;Acc:ZDB-GENE-051113-252]
OrganismDanio rerio (zebrafish)
Synonym(s)wu:fi35b01, zgc:123334, zretsat b

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
59.9
  • 59.9
  • 5.28e3
99.80
  • 99.80
  • 82.32
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
136
  • 136
99.55
  • 99.55
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
193
  • 193
99.36
  • 99.36
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
361
  • 361
98.79
  • 98.79
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
533
  • 533
98.22
  • 98.22
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
657
  • 657
97.80
  • 97.80
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000014Blastula:Sphere
1.60e3
  • 1.60e3
  • 2.94e3
  • 3.02e3
  • 3.02e3
  • 3.81e3
94.64
  • 94.64
  • 90.16
  • 89.89
  • 89.88
  • 87.25
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.76e3
  • 1.76e3
94.11
  • 94.11
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.97e3
  • 1.97e3
93.42
  • 93.42
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
2.87e3
  • 2.87e3
90.39
  • 90.39
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
2.89e3
  • 2.89e3
90.33
  • 90.33
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • UBERON:0000066fully formed stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
3.05e3
  • 3.05e3
  • 5.08e3
  • 6.45e3
  • 8.47e3
  • 8.57e3
  • 9.88e3
  • 1.08e4
  • 1.16e4
  • 1.36e4
  • 1.40e4
  • 1.41e4
89.80
  • 89.80
  • 82.98
  • 78.39
  • 71.62
  • 71.30
  • 66.93
  • 63.71
  • 61.12
  • 54.45
  • 53.20
  • 52.63
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
3.26e3
  • 3.26e3
  • 4.37e3
  • 6.09e3
  • 6.67e3
  • 7.05e3
  • 8.70e3
89.08
  • 89.08
  • 85.37
  • 79.63
  • 77.67
  • 76.41
  • 70.87
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
4.89e3
  • 4.89e3
83.63
  • 83.63
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
5.43e3
  • 5.43e3
81.82
  • 81.82
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
6.16e3
  • 6.16e3
  • 9.20e3
79.39
  • 79.39
  • 69.18
AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
7.35e3
  • 7.35e3
75.39
  • 75.39
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
7.46e3
  • 7.46e3
75.03
  • 75.03
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
8.29e3
  • 8.29e3
72.26
  • 72.26
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
8.89e3
  • 8.89e3
70.23
  • 70.23
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000104life cycle
8.96e3
  • 8.96e3
  • 9.71e3
  • 1.08e4
  • 1.36e4
69.99
  • 69.99
  • 67.48
  • 63.87
  • 54.52
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
9.66e3
  • 9.66e3
67.65
  • 67.65
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
1.02e4
  • 1.02e4
  • 1.20e4
  • 1.27e4
  • 1.69e4
  • 1.80e4
  • 1.87e4
65.84
  • 65.84
  • 59.76
  • 57.50
  • 43.32
  • 39.64
  • 37.46
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001555digestive tract
  • ZFS:0000035Larval:Protruding-mouth
1.12e4
  • 1.12e4
62.49
  • 62.49
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.27e4
  • 1.27e4
57.63
  • 57.63
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.56e4
  • 1.56e4
  • 1.86e4
  • 2.27e4
47.92
  • 47.92
  • 37.65
  • 23.94
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
1.61e4
  • 1.61e4
  • 1.97e4
46.21
  • 46.21
  • 33.98
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.72e4
  • 1.72e4
42.50
  • 42.50
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
2.10e4
  • 2.10e4
29.67
  • 29.67
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.10e4
  • 2.10e4
29.58
  • 29.58
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.20e4
  • 2.20e4
26.33
  • 26.33
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLBX510317
EnsemblENSDARG00000034989 (retsatl)
Uniprot/SPTREMBLB0S6C5, B0S6C5_DANRE
ZFINZDB-GENE-051113-252 (retsatl)

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