D. rerio Gene: pho - ENSDARG00000035133 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000035133
Namepho
Descriptionphoenix [Source:ZFIN;Acc:ZDB-GENE-030131-5935]
OrganismDanio rerio (zebrafish)
Synonym(s)fi26c04, hi43, un-named hi43, unm hi43, wu:fi26c04, zgc:165381

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000037Larval:Day 5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
1.07e3
  • 1.07e3
  • 2.77e3
  • 5.62e3
  • 5.62e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.85e3
  • 7.27e3
  • 7.47e3
  • 7.63e3
  • 7.82e3
  • 9.52e3
  • 9.94e3
  • 9.99e3
  • 1.03e4
  • 1.12e4
  • 1.17e4
96.41
  • 96.41
  • 90.73
  • 81.18
  • 81.17
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.06
  • 75.66
  • 74.99
  • 74.45
  • 73.81
  • 68.11
  • 66.71
  • 66.56
  • 65.47
  • 62.48
  • 60.93
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
2.59e3
  • 2.59e3
  • 3.62e3
  • 4.39e3
  • 6.78e3
  • 7.09e3
91.35
  • 91.35
  • 87.88
  • 85.31
  • 77.28
  • 76.28
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
2.84e3
  • 2.84e3
90.49
  • 90.49
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
2.84e3
  • 2.84e3
  • 4.33e3
  • 4.80e3
  • 7.31e3
  • 9.41e3
  • 9.86e3
90.49
  • 90.49
  • 85.52
  • 83.93
  • 75.51
  • 68.48
  • 66.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
3.76e3
  • 3.76e3
87.41
  • 87.41
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
4.40e3
  • 4.40e3
85.28
  • 85.28
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
5.13e3
  • 5.13e3
82.84
  • 82.84
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
6.08e3
  • 6.08e3
  • 1.55e4
79.63
  • 79.63
  • 48.18
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
6.40e3
  • 6.40e3
78.58
  • 78.58
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
7.08e3
  • 7.08e3
76.28
  • 76.28
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
8.05e3
  • 8.05e3
73.03
  • 73.03
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
8.24e3
  • 8.24e3
72.40
  • 72.40
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
8.34e3
  • 8.34e3
  • 1.13e4
  • 1.22e4
  • 1.27e4
  • 1.45e4
  • 1.50e4
  • 1.66e4
  • 1.67e4
  • 1.85e4
72.06
  • 72.06
  • 62.24
  • 59.11
  • 57.53
  • 51.52
  • 49.92
  • 44.53
  • 44.23
  • 38.18
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
8.96e3
  • 8.96e3
70.00
  • 70.00
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
9.65e3
  • 9.65e3
67.68
  • 67.68
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
64.30
  • 64.30
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
  • 1.22e4
64.17
  • 64.17
  • 59.22
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
1.13e4
  • 1.13e4
  • 1.45e4
62.20
  • 62.20
  • 51.43
AEIR
  • AEIR
  • AEIR
UBERON:0008904neuromast
  • ZFS:0000033Hatching:Long-pec
1.17e4
  • 1.17e4
60.70
  • 60.70
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.21e4
  • 1.21e4
59.46
  • 59.46
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.23e4
  • 1.23e4
58.66
  • 58.66
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.26e4
  • 1.26e4
57.93
  • 57.93
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.26e4
  • 1.26e4
  • 1.43e4
57.89
  • 57.89
  • 52.17
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
1.28e4
  • 1.28e4
  • 1.33e4
  • 1.34e4
57.23
  • 57.23
  • 55.48
  • 55.04
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.28e4
  • 1.28e4
57.10
  • 57.10
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.29e4
  • 1.29e4
56.87
  • 56.87
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
1.29e4
  • 1.29e4
  • 1.59e4
  • 1.76e4
56.77
  • 56.77
  • 46.78
  • 41.07
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.35e4
  • 1.35e4
54.78
  • 54.78
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.41e4
  • 1.41e4
52.90
  • 52.90
AEIR
  • AEIR
UBERON:0001846internal ear
  • ZFS:0000036Larval:Day 4
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0006334posterior lateral line
  • ZFS:0000033Hatching:Long-pec
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:2001470anterior lateral line
  • ZFS:0000033Hatching:Long-pec
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.50e4
  • 1.50e4
49.92
  • 49.92
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.57e4
  • 1.57e4
47.59
  • 47.59
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

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