D. rerio Gene: si:dkey-261j4.3 - ENSDARG00000035151 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000035151
Namesi:dkey-261j4.3
Descriptionsi:dkey-261j4.3 [Source:ZFIN;Acc:ZDB-GENE-060531-124]
OrganismDanio rerio (zebrafish)
Synonym(s)drl-l1

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
2.92e3
  • 2.92e3
90.23
  • 90.23
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
3.65e3
  • 3.65e3
87.77
  • 87.77
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
5.08e3
  • 5.08e3
  • 1.03e4
83.01
  • 83.01
  • 65.40
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.00e4
  • 1.00e4
66.48
  • 66.48
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
1.10e4
  • 1.10e4
  • 1.14e4
  • 1.20e4
  • 1.89e4
  • 2.33e4
63.28
  • 63.28
  • 61.99
  • 59.95
  • 36.82
  • 21.84
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.12e4
  • 1.12e4
  • 1.65e4
62.56
  • 62.56
  • 44.62
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.19e4
  • 1.19e4
60.12
  • 60.12
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.42e4
  • 1.42e4
52.53
  • 52.53
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.42e4
  • 1.42e4
  • 2.31e4
52.41
  • 52.41
  • 22.81
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.65e4
  • 1.65e4
44.85
  • 44.85
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.75e4
  • 1.75e4
41.43
  • 41.43
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.77e4
  • 1.77e4
40.69
  • 40.69
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.80e4
  • 1.80e4
39.74
  • 39.74
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.93e4
  • 1.93e4
35.32
  • 35.32
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
2.03e4
  • 2.03e4
32.02
  • 32.02
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.16e4
  • 2.16e4
27.79
  • 27.79
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
2.31e4
  • 2.31e4
22.61
  • 22.61
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.36e4
  • 2.36e4
20.92
  • 20.92
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSDARG00000035151 (si:dkey-261j4.3)
ZFINZDB-GENE-060531-124 (si:dkey-261j4.3)
EMBLAL935280, JX844126
Uniprot/SPTREMBLB0R154, B0R154_DANRE

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