D. rerio Gene: zgc:110249 - ENSDARG00000035221 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000035221
Namezgc:110249
Descriptionzgc:110249 [Source:ZFIN;Acc:ZDB-GENE-050522-331]
OrganismDanio rerio (zebrafish)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000307blastula
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
839
  • 839
  • 996
  • 4.20e3
  • 4.95e3
  • 7.46e3
97.19
  • 97.19
  • 96.67
  • 85.93
  • 83.43
  • 75.03
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.40e3
  • 2.40e3
91.98
  • 91.98
AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
3.68e3
  • 3.68e3
  • 3.84e3
  • 5.37e3
  • 5.70e3
  • 5.92e3
  • 6.88e3
87.68
  • 87.68
  • 87.13
  • 82.01
  • 80.92
  • 80.18
  • 76.96
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000106zygote stage
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000036Larval:Day 4
4.37e3
  • 4.37e3
  • 5.28e3
  • 5.33e3
  • 6.17e3
  • 6.47e3
  • 7.13e3
  • 7.34e3
  • 1.02e4
  • 1.09e4
  • 1.14e4
  • 1.15e4
  • 1.20e4
  • 1.23e4
  • 1.26e4
85.37
  • 85.37
  • 82.33
  • 82.16
  • 79.34
  • 78.33
  • 76.12
  • 75.42
  • 65.99
  • 63.48
  • 61.99
  • 61.63
  • 59.86
  • 58.83
  • 57.81
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
4.55e3
  • 4.55e3
84.76
  • 84.76
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
5.32e3
  • 5.32e3
82.19
  • 82.19
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
5.80e3
  • 5.80e3
  • 1.04e4
80.58
  • 80.58
  • 65.21
AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
6.14e3
  • 6.14e3
79.44
  • 79.44
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
6.22e3
  • 6.22e3
79.17
  • 79.17
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
6.22e3
  • 6.22e3
79.16
  • 79.16
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
6.25e3
  • 6.25e3
  • 7.98e3
  • 8.44e3
  • 8.95e3
79.08
  • 79.08
  • 73.26
  • 71.73
  • 70.02
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
6.33e3
  • 6.33e3
78.82
  • 78.82
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
6.35e3
  • 6.35e3
78.73
  • 78.73
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
6.71e3
  • 6.71e3
77.53
  • 77.53
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
7.04e3
  • 7.04e3
76.42
  • 76.42
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
7.08e3
  • 7.08e3
76.29
  • 76.29
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000024Segmentation:5-9 somites
  • UBERON:0000068embryo stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000026Segmentation:14-19 somites
  • UBERON:0004707pharyngula stage
  • ZFS:0000031Pharyngula:Prim-25
7.16e3
  • 7.16e3
  • 7.20e3
  • 7.56e3
  • 7.74e3
  • 8.53e3
  • 8.56e3
  • 8.67e3
  • 8.83e3
  • 9.50e3
  • 1.11e4
76.03
  • 76.03
  • 75.91
  • 74.69
  • 74.09
  • 71.45
  • 71.34
  • 70.98
  • 70.42
  • 68.18
  • 62.70
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
7.37e3
  • 7.37e3
75.31
  • 75.31
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
7.56e3
  • 7.56e3
74.68
  • 74.68
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
7.72e3
  • 7.72e3
74.16
  • 74.16
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
7.85e3
  • 7.85e3
73.73
  • 73.73
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
8.01e3
  • 8.01e3
  • 1.05e4
73.19
  • 73.19
  • 64.84
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
8.31e3
  • 8.31e3
  • 9.99e3
72.19
  • 72.19
  • 66.57
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
8.39e3
  • 8.39e3
71.91
  • 71.91
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
8.46e3
  • 8.46e3
71.68
  • 71.68
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
9.05e3
  • 9.05e3
69.69
  • 69.69
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
9.39e3
  • 9.39e3
68.55
  • 68.55
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
9.55e3
  • 9.55e3
68.04
  • 68.04
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
9.83e3
  • 9.83e3
67.09
  • 67.09
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
1.03e4
  • 1.03e4
  • 1.07e4
  • 1.25e4
65.39
  • 65.39
  • 64.33
  • 58.11
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.04e4
  • 1.04e4
  • 1.08e4
65.20
  • 65.20
  • 63.98
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.05e4
  • 1.05e4
64.86
  • 64.86
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.19e4
  • 1.19e4
60.02
  • 60.02
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.33e4
  • 1.33e4
55.46
  • 55.46
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLBC095210, CR391944
EnsemblENSDARG00000035221 (zgc:110249)
Uniprot/SPTREMBLF1QVE3, F1QVE3_DANRE, Q503R8, Q503R8_DANRE
ZFINZDB-GENE-050522-331 (zgc:110249)

Do not show this banner again