D. rerio Gene: mis18a - ENSDARG00000035333 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000035333
Namemis18a
DescriptionMIS18 kinetochore protein A [Source:ZFIN;Acc:ZDB-GENE-091204-314]
OrganismDanio rerio (zebrafish)
Synonym(s)si:dkey-189i22.1

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
2.89e3
  • 2.89e3
90.33
  • 90.33
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
3.37e3
  • 3.37e3
88.72
  • 88.72
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
3.64e3
  • 3.64e3
87.81
  • 87.81
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
4.09e3
  • 4.09e3
86.30
  • 86.30
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000109gastrula stage
4.21e3
  • 4.21e3
  • 4.73e3
  • 6.67e3
  • 7.83e3
  • 8.27e3
  • 9.51e3
85.91
  • 85.91
  • 84.18
  • 77.68
  • 73.78
  • 72.31
  • 68.16
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
5.27e3
  • 5.27e3
  • 7.14e3
  • 8.50e3
  • 9.25e3
  • 9.46e3
  • 1.00e4
  • 1.01e4
  • 1.23e4
  • 1.42e4
  • 1.43e4
82.35
  • 82.35
  • 76.08
  • 71.55
  • 69.04
  • 68.33
  • 66.43
  • 66.14
  • 58.77
  • 52.50
  • 52.28
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
5.30e3
  • 5.30e3
82.25
  • 82.25
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
5.98e3
  • 5.98e3
79.99
  • 79.99
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
6.09e3
  • 6.09e3
79.60
  • 79.60
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000106zygote stage
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
7.97e3
  • 7.97e3
  • 8.31e3
  • 8.45e3
  • 8.61e3
  • 9.29e3
  • 9.85e3
  • 1.08e4
  • 1.12e4
  • 1.15e4
  • 1.32e4
  • 1.33e4
  • 1.42e4
  • 1.51e4
73.33
  • 73.33
  • 72.17
  • 71.72
  • 71.18
  • 68.91
  • 67.01
  • 63.79
  • 62.34
  • 61.45
  • 55.89
  • 55.46
  • 52.48
  • 49.30
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
8.17e3
  • 8.17e3
  • 9.93e3
  • 1.07e4
  • 1.10e4
  • 1.12e4
72.64
  • 72.64
  • 66.76
  • 64.04
  • 63.13
  • 62.52
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
8.29e3
  • 8.29e3
72.24
  • 72.24
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
9.80e3
  • 9.80e3
67.18
  • 67.18
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
9.90e3
  • 9.90e3
66.84
  • 66.84
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.01e4
  • 1.01e4
  • 1.73e4
66.25
  • 66.25
  • 42.01
AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.01e4
  • 1.01e4
66.13
  • 66.13
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.02e4
  • 1.02e4
65.79
  • 65.79
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.03e4
  • 1.03e4
  • 1.18e4
65.58
  • 65.58
  • 60.52
AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.05e4
  • 1.05e4
64.73
  • 64.73
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
1.15e4
  • 1.15e4
  • 1.17e4
  • 1.44e4
61.53
  • 61.53
  • 60.94
  • 51.65
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.16e4
  • 1.16e4
61.25
  • 61.25
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
1.17e4
  • 1.17e4
  • 1.41e4
60.79
  • 60.79
  • 52.83
AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.18e4
  • 1.18e4
60.60
  • 60.60
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.20e4
  • 1.20e4
59.94
  • 59.94
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.24e4
  • 1.24e4
58.32
  • 58.32
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.25e4
  • 1.25e4
58.17
  • 58.17
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
1.29e4
  • 1.29e4
  • 1.51e4
  • 1.55e4
56.87
  • 56.87
  • 49.31
  • 47.98
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.36e4
  • 1.36e4
54.50
  • 54.50
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.36e4
  • 1.36e4
54.49
  • 54.49
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.42e4
  • 1.42e4
52.37
  • 52.37
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.47e4
  • 1.47e4
50.91
  • 50.91
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EMBLCR394538
EnsemblENSDARG00000035333 (mis18a)
Uniprot/SPTREMBLF1RC19, F1RC19_DANRE
ZFINZDB-GENE-091204-314 (mis18a)

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