D. rerio Gene: zgc:194261 - ENSDARG00000035340 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000035340
Namezgc:194261
Descriptionzgc:194261 [Source:ZFIN;Acc:ZDB-GENE-080723-77]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:194299

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000066fully formed stage
2.65e3
  • 2.65e3
91.14
  • 91.14
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
2.70e3
  • 2.70e3
  • 1.40e4
90.97
  • 90.97
  • 53.16
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
3.16e3
  • 3.16e3
  • 3.30e3
  • 1.18e4
  • 1.37e4
  • 1.51e4
89.44
  • 89.44
  • 88.94
  • 60.51
  • 54.19
  • 49.58
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
3.32e3
  • 3.32e3
88.90
  • 88.90
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
7.66e3
  • 7.66e3
  • 9.38e3
74.34
  • 74.34
  • 68.60
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.24e4
  • 1.24e4
58.51
  • 58.51
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.32e4
  • 1.32e4
55.74
  • 55.74
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
1.88e4
  • 1.88e4
37.11
  • 37.11
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.26e4
  • 2.26e4
24.33
  • 24.33
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.54e4
  • 2.54e4
14.97
  • 14.97
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLBC162855, BC162893, BX927323
EnsemblENSDARG00000035340 (zgc:194261)
Uniprot/SPTREMBLB3DHR0, B3DHR0_DANRE
ZFINZDB-GENE-080723-77 (zgc:194261)

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