D. rerio Gene: enc1 - ENSDARG00000035398 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000035398
Nameenc1
Descriptionectodermal-neural cortex 1 [Source:ZFIN;Acc:ZDB-GENE-060531-140]
OrganismDanio rerio (zebrafish)
Synonym(s)klhl37, si:dkey-35i22.1

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000922embryo
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
2.61e3
  • 2.61e3
  • 3.04e3
  • 4.28e3
  • 6.53e3
  • 6.57e3
  • 6.76e3
  • 7.24e3
  • 7.44e3
  • 7.51e3
  • 7.73e3
91.28
  • 91.28
  • 89.81
  • 85.67
  • 78.14
  • 78.01
  • 77.37
  • 75.76
  • 75.10
  • 74.84
  • 74.11
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000036Larval:Day 4
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000040Larval:Days 14-20
3.21e3
  • 3.21e3
  • 3.42e3
  • 4.61e3
  • 4.71e3
  • 4.95e3
  • 5.01e3
  • 5.35e3
  • 5.46e3
  • 5.80e3
  • 6.33e3
  • 8.25e3
  • 8.26e3
  • 8.58e3
89.27
  • 89.27
  • 88.56
  • 84.56
  • 84.24
  • 83.44
  • 83.22
  • 82.09
  • 81.73
  • 80.59
  • 78.81
  • 72.36
  • 72.35
  • 71.26
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
3.61e3
  • 3.61e3
87.90
  • 87.90
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
3.68e3
  • 3.68e3
87.66
  • 87.66
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
4.68e3
  • 4.68e3
84.32
  • 84.32
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
4.99e3
  • 4.99e3
  • 5.12e3
  • 6.42e3
  • 7.23e3
  • 9.90e3
  • 1.49e4
83.29
  • 83.29
  • 82.87
  • 78.51
  • 75.78
  • 66.86
  • 50.15
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
5.54e3
  • 5.54e3
  • 5.99e3
  • 6.56e3
  • 9.07e3
81.45
  • 81.45
  • 79.94
  • 78.04
  • 69.63
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
5.69e3
  • 5.69e3
  • 6.83e3
  • 1.03e4
80.94
  • 80.94
  • 77.13
  • 65.54
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
5.79e3
  • 5.79e3
80.60
  • 80.60
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
5.92e3
  • 5.92e3
  • 6.25e3
80.18
  • 80.18
  • 79.07
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
  • ZFS:0000029Pharyngula:Prim-5
6.27e3
  • 6.27e3
  • 8.65e3
  • 1.34e4
79.00
  • 79.00
  • 71.04
  • 54.99
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
6.40e3
  • 6.40e3
78.56
  • 78.56
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
7.40e3
  • 7.40e3
  • 1.36e4
75.21
  • 75.21
  • 54.51
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
7.48e3
  • 7.48e3
74.97
  • 74.97
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
7.92e3
  • 7.92e3
73.50
  • 73.50
AEIR
  • AEIR
UBERON:0001890forebrain
  • ZFS:0000025Segmentation:10-13 somites
9.96e3
  • 9.96e3
66.67
  • 66.67
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
64.04
  • 64.04
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.13e4
  • 1.13e4
62.04
  • 62.04
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.14e4
  • 1.14e4
61.79
  • 61.79
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.20e4
  • 1.20e4
59.71
  • 59.71
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.21e4
  • 1.21e4
59.56
  • 59.56
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.24e4
  • 1.24e4
58.63
  • 58.63
AEIR
  • AEIR
UBERON:0005515rhombomere 5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
1.24e4
  • 1.24e4
  • 1.28e4
58.33
  • 58.33
  • 57.14
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.31e4
  • 1.31e4
56.24
  • 56.24
AEIR
  • AEIR
UBERON:0004128optic vesicle
  • ZFS:0000025Segmentation:10-13 somites
1.31e4
  • 1.31e4
56.23
  • 56.23
AEIR
  • AEIR
UBERON:0002533post-anal tail bud
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
1.33e4
  • 1.33e4
  • 1.34e4
  • 1.38e4
55.53
  • 55.53
  • 55.24
  • 53.83
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000015Blastula:Dome
1.42e4
  • 1.42e4
  • 1.49e4
52.39
  • 52.39
  • 50.10
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.45e4
  • 1.45e4
51.57
  • 51.57
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.45e4
  • 1.45e4
51.52
  • 51.52
AEIR
  • AEIR
UBERON:0005507rhombomere 3
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
1.49e4
  • 1.49e4
  • 1.49e4
50.00
  • 50.00
  • 49.99
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.51e4
  • 1.51e4
49.51
  • 49.51
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.62e4
  • 1.62e4
45.68
  • 45.68
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.81e4
  • 1.81e4
39.27
  • 39.27
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLFP016255, FP101909
EnsemblENSDARG00000035398 (enc1)
Uniprot/SPTREMBLF1QKP6, F1QKP6_DANRE
ZFINZDB-GENE-060531-140 (enc1)

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