D. rerio Gene: cyr61l1 - ENSDARG00000035422 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000035422
Namecyr61l1
Descriptioncysteine-rich, angiogenic inducer 61 like 1 [Source:ZFIN;Acc:ZDB-GENE-050417-136]
OrganismDanio rerio (zebrafish)
Synonym(s)cyr61-l1, zcyr61-c5, zgc:112060

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.65e3
  • 1.65e3
94.46
  • 94.46
AEIR
  • AEIR
CL:0000189slow muscle cell
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000030Pharyngula:Prim-15
4.98e3
  • 4.98e3
  • 7.47e3
  • 9.33e3
  • 9.96e3
  • 1.12e4
  • 1.19e4
  • 1.19e4
83.34
  • 83.34
  • 75.00
  • 68.74
  • 66.66
  • 62.50
  • 60.00
  • 60.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002328notochord
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
8.96e3
  • 8.96e3
  • 9.96e3
69.99
  • 69.99
  • 66.66
AEIR
  • AEIR
  • AEIR
UBERON:0003051ear vesicle
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
9.96e3
  • 9.96e3
  • 1.05e4
  • 1.18e4
66.67
  • 66.67
  • 64.98
  • 60.50
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000037Larval:Day 5
9.96e3
  • 9.96e3
  • 1.30e4
66.65
  • 66.65
  • 56.38
AEIR
  • AEIR
  • AEIR
ZFA:0001086muscle pioneer (Danio)
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000027Segmentation:20-25 somites
1.12e4
  • 1.12e4
  • 1.16e4
  • 1.19e4
  • 1.28e4
62.49
  • 62.49
  • 61.10
  • 60.00
  • 57.14
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
1.13e4
  • 1.13e4
  • 1.47e4
  • 1.49e4
  • 1.85e4
  • 1.95e4
62.33
  • 62.33
  • 50.79
  • 49.98
  • 38.09
  • 34.72
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.27e4
  • 1.27e4
57.58
  • 57.58
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000029Pharyngula:Prim-5
1.37e4
  • 1.37e4
54.13
  • 54.13
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.47e4
  • 1.47e4
50.78
  • 50.78
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
1.49e4
  • 1.49e4
50.06
  • 50.06
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
1.50e4
  • 1.50e4
  • 1.77e4
49.89
  • 49.89
  • 40.81
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.54e4
  • 1.54e4
48.31
  • 48.31
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.61e4
  • 1.61e4
  • 1.84e4
46.05
  • 46.05
  • 38.33
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.64e4
  • 1.64e4
45.20
  • 45.20
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.67e4
  • 1.67e4
44.04
  • 44.04
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
1.75e4
  • 1.75e4
41.44
  • 41.44
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.04e4
  • 2.04e4
31.77
  • 31.77
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
2.15e4
  • 2.15e4
27.87
  • 27.87
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

EnsemblENSDARG00000035422 (cyr61l1)
ZFINZDB-GENE-050417-136 (cyr61l1)
EMBLCR855258
Uniprot/SPTREMBLA2CF35, A2CF35_DANRE

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