D. rerio Gene: myhc4 - ENSDARG00000035438 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000035438
Namemyhc4
Descriptionmyosin heavy chain 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6206]
OrganismDanio rerio (zebrafish)
Synonym(s)fi38g05, fmyhc2.2, wu:fi17f08, wu:fi38g05
Orthologs(s)82 orthologs
Paralog(s)21 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
7.00
  • 7.00
99.98
  • 99.98
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
9.00
  • 9.00
99.97
  • 99.97
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
11.0
  • 11.0
99.97
  • 99.97
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
18.0
  • 18.0
99.94
  • 99.94
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
52.0
  • 52.0
  • 1.72e4
99.83
  • 99.83
  • 42.41
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
154
  • 154
99.49
  • 99.49
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
1.01e3
  • 1.01e3
  • 1.58e3
  • 1.63e3
  • 1.00e4
  • 1.29e4
96.63
  • 96.63
  • 94.71
  • 94.56
  • 66.49
  • 56.71
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.62e3
  • 1.62e3
94.60
  • 94.60
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.83e3
  • 1.83e3
93.87
  • 93.87
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.86e3
  • 1.86e3
93.77
  • 93.77
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
2.10e3
  • 2.10e3
  • 2.79e3
92.96
  • 92.96
  • 90.66
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
3.73e3
  • 3.73e3
87.53
  • 87.53
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
6.53e3
  • 6.53e3
  • 1.26e4
78.15
  • 78.15
  • 57.74
AEIR
  • AEIR
  • AEIR
UBERON:0001601extra-ocular muscle
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000034Hatching:Pec-fin
7.47e3
  • 7.47e3
  • 1.49e4
75.00
  • 75.00
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000035Larval:Protruding-mouth
7.47e3
  • 7.47e3
  • 7.47e3
75.00
  • 75.00
  • 75.00
AEIR
  • AEIR
  • AEIR
UBERON:0002100trunk
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000035Larval:Protruding-mouth
8.53e3
  • 8.53e3
  • 9.96e3
  • 9.96e3
71.43
  • 71.43
  • 66.67
  • 66.67
AEIR
  • AEIR
  • AEIR
  • AEIR
ZFA:0000003adaxial cell (Danio)
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
9.13e3
  • 9.13e3
  • 1.08e4
  • 1.12e4
69.43
  • 69.43
  • 63.87
  • 62.48
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000190fast muscle cell
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
9.96e3
  • 9.96e3
  • 1.16e4
  • 1.49e4
66.66
  • 66.66
  • 61.10
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.25e4
  • 1.25e4
58.13
  • 58.13
AEIR
  • AEIR
UBERON:0000151pectoral fin
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000034Hatching:Pec-fin
1.28e4
  • 1.28e4
  • 1.49e4
57.14
  • 57.14
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000026Segmentation:14-19 somites
1.39e4
  • 1.39e4
53.41
  • 53.41
AEIR
  • AEIR
UBERON:2002200hypobranchial muscle
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000035Larval:Protruding-mouth
1.49e4
  • 1.49e4
  • 1.49e4
50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.50e4
  • 1.50e4
49.87
  • 49.87
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.53e4
  • 1.53e4
48.78
  • 48.78
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.55e4
  • 1.55e4
48.00
  • 48.00
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.68e4
  • 1.68e4
43.84
  • 43.84
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.07e4
  • 2.07e4
30.60
  • 30.60
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
2.22e4
  • 2.22e4
25.51
  • 25.51
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi19 species72 genesCompare expression
Bilateria25 species82 genesCompare expression

Orthology information comes from OMA : ENSDARG00000035438.

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Neopterygii7 genesCompare expression
Chordata16 genesCompare expression
Bilateria17 genesCompare expression
Eukaryota21 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000035438.

Cross-references

EnsemblENSDARG00000035438 (myhc4)
ZFINZDB-GENE-030131-6206 (myhc4)
EMBLBX511237
Uniprot/SPTREMBLA2BGX6, A2BGX6_DANRE, F1Q5K4, F1Q5K4_DANRE, F1QAF1, F1QAF1_DANRE

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