D. rerio Gene: atp2a1l - ENSDARG00000035458 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000035458
Nameatp2a1l
DescriptionATPase, Ca++ transporting, cardiac muscle, fast twitch 1 like [Source:ZFIN;Acc:ZDB-GENE-041229-2]
OrganismDanio rerio (zebrafish)
Synonym(s)im:7145237, si:ch211-198p7.3, zgc:154094
Orthologs(s)6 orthologs
Paralog(s)17 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002199integument
  • UBERON:0000066fully formed stage
12.2
  • 12.2
99.96
  • 99.96
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
15.0
  • 15.0
99.95
  • 99.95
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
17.3
  • 17.3
99.95
  • 99.95
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
18.0
  • 18.0
99.94
  • 99.94
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0000104life cycle
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
97.0
  • 97.0
  • 267
  • 507
  • 555
  • 1.57e3
  • 4.95e3
  • 6.12e3
  • 1.38e4
  • 1.42e4
  • 1.49e4
99.68
  • 99.68
  • 99.11
  • 98.30
  • 98.14
  • 94.74
  • 83.42
  • 79.52
  • 53.85
  • 52.35
  • 50.20
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
129
  • 129
99.57
  • 99.57
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
149
  • 149
  • 3.70e3
99.50
  • 99.50
  • 87.62
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
191
  • 191
99.36
  • 99.36
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000068embryo stage
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0004707pharyngula stage
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000029Pharyngula:Prim-5
205
  • 205
  • 573
  • 1.29e3
  • 2.92e3
  • 1.21e4
  • 1.40e4
  • 1.50e4
  • 1.76e4
99.32
  • 99.32
  • 98.08
  • 95.69
  • 90.21
  • 59.59
  • 53.24
  • 49.65
  • 40.98
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
268
  • 268
  • 404
  • 696
99.10
  • 99.10
  • 98.65
  • 97.67
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
337
  • 337
98.87
  • 98.87
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
747
  • 747
97.50
  • 97.50
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
3.31e3
  • 3.31e3
88.91
  • 88.91
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
  • ZFS:0000035Larval:Protruding-mouth
3.32e3
  • 3.32e3
  • 1.05e4
  • 1.21e4
88.88
  • 88.88
  • 64.99
  • 59.59
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
8.32e3
  • 8.32e3
72.15
  • 72.15
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
8.73e3
  • 8.73e3
  • 1.25e4
70.76
  • 70.76
  • 58.31
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
9.23e3
  • 9.23e3
69.09
  • 69.09
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.18e4
  • 1.18e4
60.57
  • 60.57
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
1.31e4
  • 1.31e4
  • 1.47e4
56.16
  • 56.16
  • 50.66
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000011Blastula:1k-cell
1.42e4
  • 1.42e4
  • 1.76e4
52.33
  • 52.33
  • 41.20
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.03e4
  • 2.03e4
32.12
  • 32.12
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Bilateria6 species6 genesCompare expression

Orthology information comes from OMA : ENSDARG00000035458.

Paralogs (same species)

Cross-references

EnsemblENSDARG00000035458 (atp2a1l)
ZFINZDB-GENE-041229-2 (atp2a1l)
EMBLBC125955, BX571950, CT954256
Uniprot/SPTREMBLA0JMP4, A0JMP4_DANRE, F1QDJ6, F1QDJ6_DANRE

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