D. rerio Gene: sh3glb2b - ENSDARG00000035470 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000035470
Namesh3glb2b
DescriptionSH3-domain GRB2-like endophilin B2b [Source:ZFIN;Acc:ZDB-GENE-040426-833]
OrganismDanio rerio (zebrafish)
Synonym(s)sh3glb2, sh3glb2 {eco:0000313|embl:aah47195.1,gn eco:0000313|zfin:zdb-gene-040426-833}, zgc:55887
Orthologs(s)24 orthologs
Paralog(s)9 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
547
  • 547
98.17
  • 98.17
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
869
  • 869
97.09
  • 97.09
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
1.28e3
  • 1.28e3
  • 1.76e3
  • 4.22e3
  • 4.34e3
95.70
  • 95.70
  • 94.10
  • 85.88
  • 85.47
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.33e3
  • 1.33e3
95.55
  • 95.55
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000015Blastula:Dome
1.45e3
  • 1.45e3
  • 1.77e3
  • 2.32e3
  • 2.34e3
  • 2.85e3
95.16
  • 95.16
  • 94.06
  • 92.22
  • 92.18
  • 90.47
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000104life cycle
1.49e3
  • 1.49e3
  • 4.62e3
  • 1.49e4
95.02
  • 95.02
  • 84.54
  • 49.94
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000036Larval:Day 4
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000068embryo stage
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
1.60e3
  • 1.60e3
  • 3.09e3
  • 4.35e3
  • 4.57e3
  • 5.35e3
  • 5.61e3
  • 5.64e3
  • 5.93e3
  • 6.09e3
  • 6.89e3
  • 7.15e3
  • 8.96e3
  • 9.71e3
  • 1.01e4
  • 1.44e4
  • 1.46e4
  • 1.47e4
94.66
  • 94.66
  • 89.65
  • 85.45
  • 84.70
  • 82.08
  • 81.23
  • 81.11
  • 80.14
  • 79.62
  • 76.92
  • 76.07
  • 70.00
  • 67.49
  • 66.25
  • 51.82
  • 51.12
  • 50.90
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
2.69e3
  • 2.69e3
90.99
  • 90.99
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
2.90e3
  • 2.90e3
  • 3.53e3
  • 3.92e3
90.28
  • 90.28
  • 88.19
  • 86.86
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
2.95e3
  • 2.95e3
  • 4.29e3
  • 4.74e3
  • 4.74e3
  • 4.98e3
  • 5.48e3
  • 5.48e3
  • 5.96e3
  • 6.14e3
  • 6.65e3
90.11
  • 90.11
  • 85.64
  • 84.14
  • 84.12
  • 83.32
  • 81.65
  • 81.64
  • 80.05
  • 79.43
  • 77.74
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
3.16e3
  • 3.16e3
89.43
  • 89.43
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
3.65e3
  • 3.65e3
87.79
  • 87.79
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
3.69e3
  • 3.69e3
87.66
  • 87.66
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
3.69e3
  • 3.69e3
87.66
  • 87.66
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
4.10e3
  • 4.10e3
86.27
  • 86.27
AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
4.60e3
  • 4.60e3
  • 4.67e3
  • 6.20e3
  • 7.71e3
  • 9.75e3
  • 1.03e4
84.60
  • 84.60
  • 84.37
  • 79.25
  • 74.20
  • 67.35
  • 65.65
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
4.80e3
  • 4.80e3
83.93
  • 83.93
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
5.24e3
  • 5.24e3
82.47
  • 82.47
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
7.38e3
  • 7.38e3
75.28
  • 75.28
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
7.68e3
  • 7.68e3
74.27
  • 74.27
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
8.38e3
  • 8.38e3
71.93
  • 71.93
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
8.75e3
  • 8.75e3
70.70
  • 70.70
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
8.88e3
  • 8.88e3
  • 9.84e3
70.25
  • 70.25
  • 67.06
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
9.43e3
  • 9.43e3
  • 1.23e4
68.43
  • 68.43
  • 58.82
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.03e4
  • 1.03e4
65.63
  • 65.63
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.03e4
  • 1.03e4
65.39
  • 65.39
AEIR
  • AEIR
UBERON:0001017central nervous system
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
1.03e4
  • 1.03e4
  • 1.07e4
  • 1.07e4
  • 1.17e4
  • 1.18e4
  • 1.20e4
  • 1.23e4
  • 1.23e4
65.37
  • 65.37
  • 64.27
  • 64.27
  • 60.70
  • 60.50
  • 59.98
  • 58.80
  • 58.80
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000032Pharyngula:High-pec
1.09e4
  • 1.09e4
  • 1.10e4
  • 1.12e4
  • 1.17e4
63.63
  • 63.63
  • 63.32
  • 62.49
  • 60.70
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005426lens vesicle
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000028Segmentation:26+ somites
1.14e4
  • 1.14e4
  • 1.20e4
  • 1.21e4
61.75
  • 61.75
  • 59.98
  • 59.36
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000965lens of camera-type eye
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
1.18e4
  • 1.18e4
  • 1.20e4
60.50
  • 60.50
  • 59.98
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.18e4
  • 1.18e4
60.46
  • 60.46
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.28e4
  • 1.28e4
57.07
  • 57.07
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.34e4
  • 1.34e4
55.14
  • 55.14
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.38e4
  • 1.38e4
53.94
  • 53.94
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.54e4
  • 1.54e4
48.59
  • 48.59
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.54e4
  • 1.54e4
48.42
  • 48.42
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi16 species17 genesCompare expression
Bilateria23 species24 genesCompare expression

Orthology information comes from OMA : ENSDARG00000035470.

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Euteleostomi1 geneCompare expression
Chordata3 genesCompare expression
Opisthokonta9 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000035470.

Cross-references

EnsemblENSDARG00000035470 (sh3glb2b)
ZFINZDB-GENE-040426-833 (sh3glb2b)
EMBLBC047195, CR749745, CR759893
Uniprot/SPTREMBLA2CEP2, A2CEP2_DANRE, A2CEP3, A2CEP3_DANRE, A2CEP5, A2CEP5_DANRE, Q802U5, Q802U5_DANRE

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