Gene: si:dkey-220k22.1 - ENSDARG00000035471 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000035471
Name	si:dkey-220k22.1
Description	si:dkey-220k22.1 [Source:ZFIN;Acc:ZDB-GENE-060526-255]
Organism	Danio rerio (zebrafish)
Orthologs(s)	13 orthologs
Paralog(s)	1 paralogs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
CL:0000094	granulocyte	[+] 1 stage UBERON:0000066fully formed stage	6.23e3 6.23e3	79.13 79.13	AEIR AEIR
UBERON:0000206	pharyngeal gill	[+] 1 stage UBERON:0000066fully formed stage	6.62e3 6.62e3	77.85 77.85	AEIR AEIR
UBERON:0000948	heart	[+] 2 stages ZFS:0000036Larval:Day 4 UBERON:0000066fully formed stage	7.20e3 7.20e3 7.79e3	75.90 75.90 73.92	AEIR AEIR AEIR
UBERON:0000033	head	[+] 2 stages UBERON:0000066fully formed stage ZFS:0000037Larval:Day 5	7.61e3 7.61e3 1.25e4	74.53 74.53 58.06	AEIR AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	7.71e3 7.71e3	74.18 74.18	AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0000066fully formed stage	7.91e3 7.91e3	73.50 73.50	AEIR AEIR
UBERON:0000955	brain	[+] 1 stage UBERON:0000066fully formed stage	8.27e3 8.27e3	72.31 72.31	AEIR AEIR
UBERON:0000307	blastula	[+] 2 stages ZFS:0000011Blastula:1k-cell ZFS:0000015Blastula:Dome	8.41e3 8.41e3 8.57e3	71.85 71.85 71.29	AEIR AEIR AEIR
UBERON:0001630	muscle organ	[+] 1 stage UBERON:0000066fully formed stage	8.83e3 8.83e3	70.42 70.42	AEIR AEIR
UBERON:0019248	early embryo	[+] 1 stage UBERON:0000107cleavage stage	9.09e3 9.09e3	69.58 69.58	AEIR AEIR
UBERON:0002385	muscle tissue	[+] 1 stage UBERON:0000066fully formed stage	9.53e3 9.53e3	68.10 68.10	AEIR AEIR
UBERON:0002548	larva	[+] 2 stages ZFS:0000037Larval:Day 5 UBERON:0000069larval stage	9.95e3 9.95e3 1.16e4	66.67 66.67 61.20	AEIR AEIR AEIR
UBERON:0003982	mature ovarian follicle	[+] 1 stage UBERON:0000066fully formed stage	1.01e4 1.01e4	66.20 66.20	AEIR AEIR
UBERON:0000160	intestine	[+] 1 stage UBERON:0000066fully formed stage	1.06e4 1.06e4	64.65 64.65	AEIR AEIR
UBERON:0000922	embryo	[+] 5 stages ZFS:0000033Hatching:Long-pec ZFS:0000037Larval:Day 5 UBERON:0004707pharyngula stage ZFS:0000029Pharyngula:Prim-5 UBERON:0000068embryo stage	1.08e4 1.08e4 1.10e4 1.35e4 1.43e4 1.44e4	63.76 63.76 63.22 54.90 52.12 51.86	AEIR AEIR AEIR AEIR AEIR AEIR
UBERON:0002415	tail	[+] 1 stage UBERON:0000066fully formed stage	1.14e4 1.14e4	61.76 61.76	AEIR AEIR
UBERON:0002106	spleen	[+] 1 stage UBERON:0000066fully formed stage	1.15e4 1.15e4	61.43 61.43	AEIR AEIR
UBERON:0002113	kidney	[+] 1 stage UBERON:0000066fully formed stage	1.20e4 1.20e4	59.98 59.98	AEIR AEIR
UBERON:0002481	bone tissue	[+] 1 stage UBERON:0000066fully formed stage	1.26e4 1.26e4	57.78 57.78	AEIR AEIR
UBERON:0000966	retina	[+] 1 stage ZFS:0000037Larval:Day 5	1.34e4 1.34e4	55.23 55.23	AEIR AEIR
UBERON:0006860	swim bladder	[+] 1 stage UBERON:0000066fully formed stage	1.36e4 1.36e4	54.62 54.62	AEIR AEIR
UBERON:0000970	eye	[+] 1 stage ZFS:0000031Pharyngula:Prim-25	1.42e4 1.42e4	52.60 52.60	AEIR AEIR
UBERON:0007132	head kidney	[+] 1 stage UBERON:0000066fully formed stage	1.42e4 1.42e4	52.35 52.35	AEIR AEIR
UBERON:0000473	testis	[+] 1 stage UBERON:0000066fully formed stage	1.43e4 1.43e4	52.24 52.24	AEIR AEIR
UBERON:0004734	gastrula	[+] 2 stages ZFS:0000019Gastrula:Shield ZFS:0000022Gastrula:Bud	1.43e4 1.43e4 1.68e4	52.02 52.02 43.78	AEIR AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
Euteleostomi	13 species Homo sapiens (human) Mus musculus (mouse) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Sus scrofa (pig) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Felis catus (cat) Cavia porcellus (guinea pig) Erinaceus europaeus (hedgehog)	13 genes ENSG00000106780 MEGF9 ENSMUSG00000039270 Megf9 ENSPTRG00000021303 MEGF9 ENSGGOG00000015277 MEGF9 ENSMMUG00000015885 MEGF9 ENSRNOG00000005932 Megf9 ENSBTAG00000013706 MEGF9 ENSSSCG00000005506 MEGF9 ENSECAG00000000134 MEGF9 ENSOCUG00000009745 MEGF9 ENSFCAG00000008629 MEGF9 ENSCPOG00000007428 MEGF9 ENSEEUG00000007602 MEGF9	Compare expression	[+]

Orthology information comes from OMA : ENSDARG00000035471.

Paralogs (same species)

Taxon name	Gene(s)	Expression comparison	See details
Euteleostomi	1 gene ENSDARG00000078536 si:ch211-158d24.2	Compare expression	[+]

Paralogy information comes from OMA : ENSDARG00000035471.

Cross-references

Ensembl	ENSDARG00000035471 (si:dkey-220k22.1)
ZFIN	ZDB-GENE-060526-255 (si:dkey-220k22.1)
EMBL	CR759893
Uniprot/SPTREMBL	A2CEV2, A2CEV2_DANRE