D. rerio Gene: tm2d2 - ENSDARG00000035515 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000035515
Nametm2d2
DescriptionTM2 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040718-387]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:92201

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
1.75e3
  • 1.75e3
  • 1.50e4
94.13
  • 94.13
  • 49.89
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
2.51e3
  • 2.51e3
91.59
  • 91.59
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
2.61e3
  • 2.61e3
91.27
  • 91.27
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
3.39e3
  • 3.39e3
88.66
  • 88.66
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
3.50e3
  • 3.50e3
88.27
  • 88.27
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
4.03e3
  • 4.03e3
86.52
  • 86.52
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
4.11e3
  • 4.11e3
86.25
  • 86.25
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000104life cycle
4.45e3
  • 4.45e3
  • 1.29e4
  • 1.49e4
85.09
  • 85.09
  • 56.93
  • 49.94
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
4.46e3
  • 4.46e3
  • 6.76e3
  • 1.45e4
85.07
  • 85.07
  • 77.38
  • 51.58
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
4.55e3
  • 4.55e3
84.77
  • 84.77
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
4.71e3
  • 4.71e3
  • 5.84e3
84.24
  • 84.24
  • 80.45
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
4.71e3
  • 4.71e3
  • 6.91e3
  • 7.58e3
  • 7.77e3
  • 1.21e4
  • 1.38e4
  • 1.51e4
  • 1.55e4
84.23
  • 84.23
  • 76.85
  • 74.63
  • 73.97
  • 59.34
  • 53.71
  • 49.32
  • 48.13
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
4.80e3
  • 4.80e3
83.94
  • 83.94
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
4.92e3
  • 4.92e3
83.51
  • 83.51
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
4.95e3
  • 4.95e3
83.43
  • 83.43
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
5.00e3
  • 5.00e3
83.26
  • 83.26
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
5.55e3
  • 5.55e3
81.41
  • 81.41
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
5.73e3
  • 5.73e3
  • 7.76e3
80.81
  • 80.81
  • 74.01
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
5.74e3
  • 5.74e3
80.79
  • 80.79
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
6.13e3
  • 6.13e3
79.48
  • 79.48
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
6.15e3
  • 6.15e3
79.42
  • 79.42
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
6.32e3
  • 6.32e3
78.84
  • 78.84
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
7.08e3
  • 7.08e3
76.31
  • 76.31
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
7.39e3
  • 7.39e3
  • 8.56e3
  • 1.32e4
  • 1.54e4
75.26
  • 75.26
  • 71.35
  • 55.82
  • 48.52
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
8.12e3
  • 8.12e3
  • 1.34e4
  • 1.49e4
72.83
  • 72.83
  • 55.14
  • 49.98
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
1.01e4
  • 1.01e4
  • 1.59e4
  • 1.77e4
66.25
  • 66.25
  • 46.92
  • 40.66
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
1.30e4
  • 1.30e4
56.48
  • 56.48
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000036Larval:Day 4
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000037Larval:Day 5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000040Larval:Days 14-20
1.44e4
  • 1.44e4
  • 1.46e4
  • 1.48e4
  • 1.69e4
  • 1.72e4
  • 1.72e4
  • 1.75e4
  • 1.77e4
  • 1.78e4
  • 1.78e4
  • 1.78e4
  • 1.79e4
  • 1.81e4
  • 1.83e4
51.88
  • 51.88
  • 51.12
  • 50.61
  • 43.57
  • 42.46
  • 42.37
  • 41.27
  • 40.62
  • 40.56
  • 40.43
  • 40.38
  • 40.18
  • 39.42
  • 38.72
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.65e4
  • 1.65e4
44.73
  • 44.73
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.66e4
  • 1.66e4
44.48
  • 44.48
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EMBLBC075934, BX927282
EnsemblENSDARG00000035515 (tm2d2)
Uniprot/SPTREMBLA0A0H2UKD7, A0A0H2UKD7_DANRE
Uniprot/SWISSPROTQ6DHN3, TM2D2_DANRE
ZFINZDB-GENE-040718-387 (tm2d2)

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