D. rerio Gene: brwd3 - ENSDARG00000035540 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000035540
Namebrwd3
Descriptionbromodomain and WD repeat domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-100921-43]
OrganismDanio rerio (zebrafish)
Synonym(s)si:dkey-237j10.3

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.15e3
  • 1.15e3
96.14
  • 96.14
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.17e3
  • 1.17e3
96.07
  • 96.07
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
1.63e3
  • 1.63e3
  • 1.85e3
94.54
  • 94.54
  • 93.80
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
2.97e3
  • 2.97e3
  • 3.30e3
90.04
  • 90.04
  • 88.94
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
4.61e3
  • 4.61e3
  • 6.41e3
  • 6.46e3
  • 6.79e3
  • 1.03e4
84.56
  • 84.56
  • 78.54
  • 78.38
  • 77.26
  • 65.56
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
5.23e3
  • 5.23e3
82.49
  • 82.49
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
6.87e3
  • 6.87e3
77.00
  • 77.00
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
6.90e3
  • 6.90e3
76.91
  • 76.91
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
7.26e3
  • 7.26e3
75.70
  • 75.70
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
7.89e3
  • 7.89e3
  • 1.29e4
73.60
  • 73.60
  • 56.95
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
8.16e3
  • 8.16e3
72.69
  • 72.69
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
8.44e3
  • 8.44e3
71.74
  • 71.74
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
8.78e3
  • 8.78e3
  • 1.20e4
70.60
  • 70.60
  • 59.88
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
9.30e3
  • 9.30e3
68.87
  • 68.87
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
65.29
  • 65.29
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.06e4
  • 1.06e4
64.56
  • 64.56
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
64.23
  • 64.23
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
64.04
  • 64.04
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
64.04
  • 64.04
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.10e4
  • 1.10e4
63.27
  • 63.27
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.10e4
  • 1.10e4
63.19
  • 63.19
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.14e4
  • 1.14e4
61.92
  • 61.92
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.61e4
  • 1.61e4
46.08
  • 46.08
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.84e4
  • 1.84e4
38.51
  • 38.51
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

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