D. rerio Gene: jmjd7 - ENSDARG00000035546 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000035546
Namejmjd7
Descriptionjumonji domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-050417-86]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:110265

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
3.43e3
  • 3.43e3
88.51
  • 88.51
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
4.39e3
  • 4.39e3
85.30
  • 85.30
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
5.16e3
  • 5.16e3
82.73
  • 82.73
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000068embryo stage
  • UBERON:0000066fully formed stage
5.43e3
  • 5.43e3
  • 5.97e3
  • 6.22e3
  • 6.79e3
  • 7.47e3
  • 9.13e3
  • 1.48e4
  • 1.50e4
81.81
  • 81.81
  • 80.00
  • 79.16
  • 77.27
  • 74.99
  • 69.43
  • 50.61
  • 49.81
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
5.69e3
  • 5.69e3
  • 1.47e4
80.96
  • 80.96
  • 50.88
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
6.95e3
  • 6.95e3
76.74
  • 76.74
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
7.30e3
  • 7.30e3
  • 1.03e4
75.55
  • 75.55
  • 65.47
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
7.51e3
  • 7.51e3
74.84
  • 74.84
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
7.76e3
  • 7.76e3
74.01
  • 74.01
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
7.91e3
  • 7.91e3
  • 9.60e3
73.50
  • 73.50
  • 67.87
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
8.02e3
  • 8.02e3
73.15
  • 73.15
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
8.51e3
  • 8.51e3
71.52
  • 71.52
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
8.91e3
  • 8.91e3
  • 9.33e3
70.17
  • 70.17
  • 68.75
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
8.99e3
  • 8.99e3
69.89
  • 69.89
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
9.16e3
  • 9.16e3
  • 9.44e3
  • 9.50e3
  • 1.31e4
  • 1.40e4
69.32
  • 69.32
  • 68.38
  • 68.19
  • 56.26
  • 52.96
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
9.38e3
  • 9.38e3
68.59
  • 68.59
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
9.76e3
  • 9.76e3
67.33
  • 67.33
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
9.99e3
  • 9.99e3
66.54
  • 66.54
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.02e4
  • 1.02e4
66.01
  • 66.01
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.02e4
  • 1.02e4
65.71
  • 65.71
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.06e4
  • 1.06e4
64.66
  • 64.66
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.06e4
  • 1.06e4
64.51
  • 64.51
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
1.13e4
  • 1.13e4
  • 1.17e4
62.16
  • 62.16
  • 60.68
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.15e4
  • 1.15e4
61.39
  • 61.39
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.16e4
  • 1.16e4
61.26
  • 61.26
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
1.34e4
  • 1.34e4
55.16
  • 55.16
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

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