Gene: cfap73 - ENSDARG00000035550 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000035550
Name	cfap73
Description	cilia and flagella associated protein 73 [Source:ZFIN;Acc:ZDB-GENE-060526-194]
Organism	Danio rerio (zebrafish)
Synonym(s)	ccdc42b, si:dkey-114c15.1
Orthologs(s)	14 orthologs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0006860	swim bladder	[+] 1 stage UBERON:0000066fully formed stage	6.34e3 6.34e3	78.78 78.78	AEIR AEIR
UBERON:0000473	testis	[+] 1 stage UBERON:0000066fully formed stage	8.57e3 8.57e3	71.31 71.31	AEIR AEIR
UBERON:0000948	heart	[+] 1 stage UBERON:0000066fully formed stage	1.25e4 1.25e4	58.05 58.05	AEIR AEIR
UBERON:0007132	head kidney	[+] 1 stage UBERON:0000066fully formed stage	1.56e4 1.56e4	47.66 47.66	AEIR AEIR
UBERON:0000307	blastula	[+] 1 stage ZFS:0000011Blastula:1k-cell	1.62e4 1.62e4	45.85 45.85	AEIR AEIR
CL:0000094	granulocyte	[+] 1 stage UBERON:0000066fully formed stage	1.73e4 1.73e4	41.97 41.97	AEIR AEIR
UBERON:0000955	brain	[+] 1 stage UBERON:0000066fully formed stage	1.74e4 1.74e4	41.73 41.73	AEIR AEIR
UBERON:0000922	embryo	[+] 5 stages UBERON:0004707pharyngula stage UBERON:0000068embryo stage ZFS:0000029Pharyngula:Prim-5 ZFS:0000037Larval:Day 5 ZFS:0000033Hatching:Long-pec	1.78e4 1.78e4 1.86e4 1.93e4 2.18e4 2.18e4	40.29 40.29 37.88 35.44 27.09 26.86	AEIR AEIR AEIR AEIR AEIR AEIR
UBERON:0019248	early embryo	[+] 1 stage UBERON:0000107cleavage stage	1.78e4 1.78e4	40.24 40.24	AEIR AEIR
UBERON:0000966	retina	[+] 1 stage ZFS:0000037Larval:Day 5	1.79e4 1.79e4	40.01 40.01	AEIR AEIR
UBERON:0002548	larva	[+] 1 stage UBERON:0000069larval stage	1.89e4 1.89e4	36.85 36.85	AEIR AEIR
UBERON:0002481	bone tissue	[+] 1 stage UBERON:0000066fully formed stage	1.89e4 1.89e4	36.59 36.59	AEIR AEIR
UBERON:0000033	head	[+] 2 stages ZFS:0000037Larval:Day 5 UBERON:0000066fully formed stage	1.93e4 1.93e4 2.24e4	35.35 35.35 25.03	AEIR AEIR AEIR
UBERON:0002415	tail	[+] 1 stage UBERON:0000066fully formed stage	1.95e4 1.95e4	34.72 34.72	AEIR AEIR
UBERON:0002385	muscle tissue	[+] 1 stage UBERON:0000066fully formed stage	2.03e4 2.03e4	31.97 31.97	AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	2.17e4 2.17e4	27.50 27.50	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
Euteleostomi	1 species Xenopus tropicalis (western clawed frog)	1 gene ENSXETG00000016411 ccdc42b	Compare expression	[+]
Bilateria	7 species Drosophila melanogaster (fruit fly) Xenopus tropicalis (western clawed frog) Drosophila ananassae Drosophila mojavensis Drosophila simulans Drosophila virilis Drosophila yakuba	14 genes FBgn0032768 CG17564 FBgn0032769 CG10750 ENSXETG00000016411 ccdc42b FBgn0091738 GF14711 FBgn0092226 GF15201 FBgn0092227 GF15202 FBgn0136759 GI14005 FBgn0139971 GI17227 FBgn0193189 GD21768 FBgn0195544 GD24193 FBgn0205153 GJ17986 FBgn0205410 GJ18249 FBgn0230386 GE12659 FBgn0230931 GE13241	Compare expression	[+]

Orthology information comes from OMA : ENSDARG00000035550.

Cross-references

Ensembl	ENSDARG00000035550 (cfap73)
ZFIN	ZDB-GENE-060526-194 (cfap73)
EMBL	BX640539
Uniprot/SPTREMBL	A3KQF2, A3KQF2_DANRE, F1Q5C8, F1Q5C8_DANRE