D. rerio Gene: rps6ka3a - ENSDARG00000035556 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000035556
Namerps6ka3a
Descriptionribosomal protein S6 kinase a, polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-030219-119]
OrganismDanio rerio (zebrafish)
Synonym(s)id:ibd1103, rps6ka3, si:ch211-114c12.12, wu:fk86e02, zgc:56006

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
1.34e3
  • 1.34e3
  • 2.37e3
95.52
  • 95.52
  • 92.06
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
2.01e3
  • 2.01e3
  • 2.43e3
  • 4.54e3
  • 5.94e3
  • 6.24e3
93.26
  • 93.26
  • 91.85
  • 84.79
  • 80.12
  • 79.11
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
2.46e3
  • 2.46e3
91.77
  • 91.77
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
2.48e3
  • 2.48e3
91.69
  • 91.69
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
2.56e3
  • 2.56e3
91.44
  • 91.44
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
2.58e3
  • 2.58e3
  • 6.33e3
  • 6.79e3
  • 7.45e3
91.35
  • 91.35
  • 78.82
  • 77.27
  • 75.06
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.65e3
  • 2.65e3
91.14
  • 91.14
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
2.81e3
  • 2.81e3
90.59
  • 90.59
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
2.81e3
  • 2.81e3
90.59
  • 90.59
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
2.81e3
  • 2.81e3
90.58
  • 90.58
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
2.82e3
  • 2.82e3
  • 4.47e3
  • 5.89e3
  • 7.73e3
  • 8.43e3
  • 9.08e3
90.56
  • 90.56
  • 85.05
  • 80.29
  • 74.11
  • 71.79
  • 69.60
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.93e3
  • 2.93e3
90.19
  • 90.19
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
3.55e3
  • 3.55e3
88.12
  • 88.12
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
3.74e3
  • 3.74e3
87.49
  • 87.49
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
4.02e3
  • 4.02e3
86.54
  • 86.54
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000036Larval:Day 4
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000037Larval:Day 5
4.04e3
  • 4.04e3
  • 4.18e3
  • 7.91e3
  • 8.04e3
  • 8.14e3
  • 8.17e3
  • 8.25e3
  • 8.43e3
  • 8.50e3
  • 8.82e3
  • 8.84e3
  • 9.11e3
  • 9.54e3
  • 9.93e3
86.48
  • 86.48
  • 86.00
  • 73.50
  • 73.07
  • 72.75
  • 72.64
  • 72.36
  • 71.79
  • 71.53
  • 70.48
  • 70.41
  • 69.51
  • 68.05
  • 66.76
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
4.05e3
  • 4.05e3
86.43
  • 86.43
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000030Pharyngula:Prim-15
4.45e3
  • 4.45e3
  • 5.11e3
  • 5.25e3
  • 5.50e3
  • 6.27e3
  • 6.47e3
  • 6.70e3
  • 6.88e3
  • 6.98e3
  • 8.04e3
85.09
  • 85.09
  • 82.90
  • 82.41
  • 81.59
  • 79.01
  • 78.33
  • 77.57
  • 76.95
  • 76.64
  • 73.09
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
4.61e3
  • 4.61e3
84.56
  • 84.56
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
4.97e3
  • 4.97e3
83.36
  • 83.36
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
5.04e3
  • 5.04e3
83.13
  • 83.13
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
5.69e3
  • 5.69e3
80.96
  • 80.96
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
6.28e3
  • 6.28e3
78.97
  • 78.97
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
6.57e3
  • 6.57e3
  • 7.92e3
78.02
  • 78.02
  • 73.49
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
6.58e3
  • 6.58e3
  • 1.24e4
77.96
  • 77.96
  • 58.43
AEIR
  • AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
6.89e3
  • 6.89e3
  • 8.54e3
  • 8.79e3
  • 8.79e3
  • 8.96e3
  • 9.13e3
  • 9.13e3
  • 9.13e3
  • 9.71e3
76.92
  • 76.92
  • 71.41
  • 70.57
  • 70.57
  • 69.98
  • 69.43
  • 69.43
  • 69.43
  • 67.48
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
6.97e3
  • 6.97e3
  • 7.74e3
  • 8.58e3
76.65
  • 76.65
  • 74.08
  • 71.26
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
7.10e3
  • 7.10e3
76.22
  • 76.22
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
8.04e3
  • 8.04e3
73.07
  • 73.07
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
9.32e3
  • 9.32e3
68.81
  • 68.81
AEIR
  • AEIR
UBERON:0003060pronephric duct
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
1.05e4
  • 1.05e4
  • 1.08e4
  • 1.14e4
  • 1.21e4
  • 1.31e4
  • 1.31e4
  • 1.34e4
  • 1.42e4
64.98
  • 64.98
  • 63.87
  • 61.75
  • 59.36
  • 56.23
  • 56.23
  • 54.97
  • 52.60
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.11e4
  • 1.11e4
62.73
  • 62.73
AEIR
  • AEIR
UBERON:0003051ear vesicle
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
1.18e4
  • 1.18e4
  • 1.20e4
60.50
  • 60.50
  • 59.98
AEIR
  • AEIR
  • AEIR
UBERON:2001055pronephric duct opening
  • ZFS:0000029Pharyngula:Prim-5
1.19e4
  • 1.19e4
60.00
  • 60.00
AEIR
  • AEIR
UBERON:0005886post-hyoid pharyngeal arch skeleton
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
1.23e4
  • 1.23e4
  • 1.23e4
  • 1.28e4
58.80
  • 58.80
  • 58.80
  • 57.12
AEIR
  • AEIR
  • AEIR
  • AEIR
ZFA:0001065lateral mesoderm (Danio)
  • ZFS:0000024Segmentation:5-9 somites
1.24e4
  • 1.24e4
58.33
  • 58.33
AEIR
  • AEIR
UBERON:0001003skin epidermis
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
1.32e4
  • 1.32e4
  • 1.40e4
  • 1.42e4
  • 1.42e4
  • 1.42e4
55.86
  • 55.86
  • 53.10
  • 52.47
  • 52.47
  • 52.35
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003055periderm
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
1.32e4
  • 1.32e4
  • 1.33e4
  • 1.39e4
  • 1.39e4
55.86
  • 55.86
  • 55.53
  • 53.31
  • 53.31
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLAL928875
EnsemblENSDARG00000035556 (rps6ka3a)
Uniprot/SPTREMBLB0R0M9, B0R0M9_DANRE
ZFINZDB-GENE-030219-119 (rps6ka3a)

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