D. rerio Gene: ficd - ENSDARG00000035595 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000035595
Nameficd
DescriptionFIC domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-6588]
OrganismDanio rerio (zebrafish)
Synonym(s)fk44h08, hype, si:ch211-191d15.5, wu:fk44h08, zgc:110336
Orthologs(s)26 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
3.43e3
  • 3.43e3
  • 1.47e4
88.50
  • 88.50
  • 50.63
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
5.36e3
  • 5.36e3
  • 5.95e3
  • 7.14e3
  • 7.42e3
  • 7.63e3
82.06
  • 82.06
  • 80.08
  • 76.10
  • 75.17
  • 74.45
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000027Segmentation:20-25 somites
  • UBERON:0004707pharyngula stage
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000106zygote stage
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
  • ZFS:0000049segmentation
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
5.69e3
  • 5.69e3
  • 7.47e3
  • 7.47e3
  • 7.91e3
  • 7.97e3
  • 8.15e3
  • 8.15e3
  • 8.15e3
  • 8.15e3
  • 8.15e3
  • 8.15e3
  • 8.15e3
  • 8.15e3
  • 8.15e3
  • 8.15e3
  • 8.15e3
  • 8.15e3
  • 8.15e3
  • 8.71e3
  • 8.71e3
  • 8.79e3
  • 9.62e3
  • 9.96e3
  • 9.96e3
  • 1.04e4
  • 1.08e4
  • 1.12e4
  • 1.20e4
  • 1.21e4
  • 1.35e4
  • 1.38e4
  • 1.40e4
  • 1.42e4
  • 1.43e4
  • 1.44e4
  • 1.45e4
  • 1.49e4
  • 1.49e4
  • 1.50e4
  • 1.50e4
80.95
  • 80.95
  • 74.99
  • 74.99
  • 73.52
  • 73.32
  • 72.72
  • 72.72
  • 72.72
  • 72.72
  • 72.72
  • 72.72
  • 72.72
  • 72.72
  • 72.72
  • 72.72
  • 72.72
  • 72.72
  • 72.72
  • 70.82
  • 70.82
  • 70.57
  • 67.78
  • 66.65
  • 66.65
  • 65.25
  • 63.74
  • 62.47
  • 59.87
  • 59.47
  • 54.71
  • 53.76
  • 53.15
  • 52.58
  • 52.18
  • 51.86
  • 51.51
  • 50.25
  • 49.96
  • 49.92
  • 49.80
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
6.55e3
  • 6.55e3
78.08
  • 78.08
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
6.73e3
  • 6.73e3
77.46
  • 77.46
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
7.11e3
  • 7.11e3
76.18
  • 76.18
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
7.76e3
  • 7.76e3
74.03
  • 74.03
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
7.77e3
  • 7.77e3
73.99
  • 73.99
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
8.25e3
  • 8.25e3
  • 8.50e3
  • 9.77e3
  • 1.04e4
  • 1.06e4
  • 1.08e4
72.39
  • 72.39
  • 71.54
  • 67.29
  • 65.28
  • 64.47
  • 63.74
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
8.25e3
  • 8.25e3
72.37
  • 72.37
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
8.39e3
  • 8.39e3
71.91
  • 71.91
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
9.27e3
  • 9.27e3
68.96
  • 68.96
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
9.30e3
  • 9.30e3
68.85
  • 68.85
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
9.43e3
  • 9.43e3
68.42
  • 68.42
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
9.56e3
  • 9.56e3
68.01
  • 68.01
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
9.62e3
  • 9.62e3
  • 1.29e4
67.78
  • 67.78
  • 56.78
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
9.81e3
  • 9.81e3
  • 1.08e4
  • 1.09e4
  • 1.12e4
67.17
  • 67.17
  • 63.75
  • 63.56
  • 62.40
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
9.98e3
  • 9.98e3
66.57
  • 66.57
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
1.00e4
  • 1.00e4
  • 1.54e4
66.52
  • 66.52
  • 48.55
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
65.19
  • 65.19
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.12e4
  • 1.12e4
62.48
  • 62.48
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.14e4
  • 1.14e4
61.75
  • 61.75
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.17e4
  • 1.17e4
60.86
  • 60.86
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.18e4
  • 1.18e4
60.63
  • 60.63
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.20e4
  • 1.20e4
59.96
  • 59.96
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000037Larval:Day 5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
1.20e4
  • 1.20e4
  • 1.21e4
  • 1.26e4
  • 1.28e4
  • 1.30e4
  • 1.34e4
  • 1.42e4
  • 1.44e4
  • 1.45e4
  • 1.47e4
59.66
  • 59.66
  • 59.51
  • 57.66
  • 57.04
  • 56.44
  • 55.14
  • 52.43
  • 51.72
  • 51.41
  • 50.87
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.23e4
  • 1.23e4
58.72
  • 58.72
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.27e4
  • 1.27e4
57.41
  • 57.41
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
1.28e4
  • 1.28e4
  • 1.30e4
57.28
  • 57.28
  • 56.49
AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.34e4
  • 1.34e4
55.20
  • 55.20
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
1.40e4
  • 1.40e4
  • 1.56e4
  • 1.61e4
53.00
  • 53.00
  • 47.88
  • 46.17
AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi19 species19 genesCompare expression
Bilateria26 species26 genesCompare expression

Orthology information comes from OMA : ENSDARG00000035595.

Cross-references

EnsemblENSDARG00000035595 (ficd)
ZFINZDB-GENE-030131-6588 (ficd)
EMBLAL845326, BC092885
Uniprot/SWISSPROTFICD_DANRE, Q6ZM51

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