D. rerio Gene: si:ch211-193k19.1 - ENSDARG00000035660 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000035660
Namesi:ch211-193k19.1
Descriptionsi:ch211-193k19.1 [Source:ZFIN;Acc:ZDB-GENE-060503-110]
OrganismDanio rerio (zebrafish)
Orthologs(s)16 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
2.71e3
  • 2.71e3
90.95
  • 90.95
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
3.52e3
  • 3.52e3
88.21
  • 88.21
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
5.35e3
  • 5.35e3
82.08
  • 82.08
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
7.03e3
  • 7.03e3
  • 7.29e3
76.48
  • 76.48
  • 75.60
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
7.87e3
  • 7.87e3
73.63
  • 73.63
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
8.11e3
  • 8.11e3
72.83
  • 72.83
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
8.16e3
  • 8.16e3
72.66
  • 72.66
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
8.26e3
  • 8.26e3
72.35
  • 72.35
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
8.55e3
  • 8.55e3
71.36
  • 71.36
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
8.57e3
  • 8.57e3
  • 1.56e4
71.31
  • 71.31
  • 47.84
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
8.62e3
  • 8.62e3
71.14
  • 71.14
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
9.22e3
  • 9.22e3
69.13
  • 69.13
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
9.43e3
  • 9.43e3
68.42
  • 68.42
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
9.66e3
  • 9.66e3
67.64
  • 67.64
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
9.82e3
  • 9.82e3
67.12
  • 67.12
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
9.82e3
  • 9.82e3
  • 1.07e4
67.11
  • 67.11
  • 64.16
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
65.30
  • 65.30
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.07e4
  • 1.07e4
  • 1.29e4
64.01
  • 64.01
  • 56.91
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
1.08e4
  • 1.08e4
  • 1.19e4
  • 1.22e4
  • 1.26e4
  • 1.27e4
63.96
  • 63.96
  • 60.12
  • 59.08
  • 57.96
  • 57.53
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.11e4
  • 1.11e4
62.74
  • 62.74
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.13e4
  • 1.13e4
62.24
  • 62.24
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.19e4
  • 1.19e4
  • 1.34e4
60.16
  • 60.16
  • 55.12
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.21e4
  • 1.21e4
59.63
  • 59.63
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.27e4
  • 1.27e4
57.53
  • 57.53
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.68e4
  • 1.68e4
43.62
  • 43.62
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Cross-references

EnsemblENSDARG00000035660 (si:ch211-193k19.1)
ZFINZDB-GENE-060503-110 (si:ch211-193k19.1)
EMBLCR356238
Uniprot/SPTREMBLF1Q5E5, F1Q5E5_DANRE, F1QYL7, F1QYL7_DANRE

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