D. rerio Gene: ptp4a2b - ENSDARG00000035676 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000035676
Nameptp4a2b
Descriptionprotein tyrosine phosphatase type IVA, member 2b [Source:ZFIN;Acc:ZDB-GENE-041114-111]
OrganismDanio rerio (zebrafish)
Synonym(s)fc05f09, prl-2, ptp4a2, wu:fc05f09, wu:fi84b06, zgc:101724, zgc:101724gn

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
199
  • 199
99.34
  • 99.34
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
205
  • 205
99.32
  • 99.32
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
286
  • 286
  • 319
  • 726
  • 1.94e3
  • 3.09e3
99.05
  • 99.05
  • 98.94
  • 97.57
  • 93.51
  • 89.67
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
398
  • 398
  • 689
  • 1.47e3
  • 1.52e3
  • 1.68e3
  • 2.42e3
98.67
  • 98.67
  • 97.70
  • 95.07
  • 94.90
  • 94.37
  • 91.89
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
453
  • 453
  • 1.87e3
  • 2.23e3
  • 2.28e3
98.49
  • 98.49
  • 93.75
  • 92.53
  • 92.36
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000036Larval:Day 4
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:00072334 cell stage
  • UBERON:0000068embryo stage
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
472
  • 472
  • 773
  • 1.12e3
  • 1.27e3
  • 1.54e3
  • 1.56e3
  • 1.83e3
  • 1.96e3
  • 1.99e3
  • 2.02e3
  • 2.17e3
  • 2.53e3
  • 2.61e3
  • 2.75e3
  • 6.79e3
  • 1.27e4
  • 1.34e4
  • 1.47e4
98.42
  • 98.42
  • 97.41
  • 96.24
  • 95.74
  • 94.85
  • 94.77
  • 93.88
  • 93.45
  • 93.35
  • 93.24
  • 92.73
  • 91.54
  • 91.25
  • 90.79
  • 77.27
  • 57.49
  • 55.05
  • 50.90
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
567
  • 567
98.10
  • 98.10
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
643
  • 643
97.85
  • 97.85
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
646
  • 646
97.84
  • 97.84
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
691
  • 691
97.69
  • 97.69
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
728
  • 728
97.57
  • 97.57
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
784
  • 784
97.38
  • 97.38
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
911
  • 911
96.95
  • 96.95
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
960
  • 960
  • 1.39e3
96.79
  • 96.79
  • 95.34
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
965
  • 965
96.77
  • 96.77
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
971
  • 971
96.75
  • 96.75
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.02e3
  • 1.02e3
96.59
  • 96.59
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.04e3
  • 1.04e3
96.54
  • 96.54
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.08e3
  • 1.08e3
96.39
  • 96.39
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
1.12e3
  • 1.12e3
  • 1.44e3
  • 1.12e4
96.25
  • 96.25
  • 95.17
  • 62.50
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.19e3
  • 1.19e3
96.01
  • 96.01
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.22e3
  • 1.22e3
95.93
  • 95.93
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
1.27e3
  • 1.27e3
  • 1.66e3
95.75
  • 95.75
  • 94.45
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.35e3
  • 1.35e3
95.49
  • 95.49
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000035Larval:Protruding-mouth
1.36e3
  • 1.36e3
  • 2.61e3
  • 1.22e4
  • 1.36e4
95.43
  • 95.43
  • 91.28
  • 59.08
  • 54.53
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0000068embryo stage
1.42e3
  • 1.42e3
  • 1.56e3
  • 1.72e3
  • 1.79e3
  • 1.79e3
  • 2.04e3
  • 2.06e3
  • 2.13e3
  • 2.27e3
  • 2.40e3
95.24
  • 95.24
  • 94.78
  • 94.24
  • 94.02
  • 94.01
  • 93.17
  • 93.09
  • 92.86
  • 92.41
  • 91.97
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.47e3
  • 1.47e3
95.07
  • 95.07
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
1.72e3
  • 1.72e3
  • 1.92e3
  • 2.59e3
94.24
  • 94.24
  • 93.56
  • 91.35
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.78e3
  • 1.78e3
94.05
  • 94.05
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.81e3
  • 1.81e3
93.96
  • 93.96
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
2.07e3
  • 2.07e3
93.08
  • 93.08
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
2.17e3
  • 2.17e3
92.74
  • 92.74
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
3.77e3
  • 3.77e3
  • 1.44e4
87.39
  • 87.39
  • 51.84
AEIR
  • AEIR
  • AEIR
UBERON:0003082myotome
  • ZFS:0000035Larval:Protruding-mouth
7.47e3
  • 7.47e3
75.00
  • 75.00
AEIR
  • AEIR
UBERON:0008904neuromast
  • ZFS:0000037Larval:Day 5
7.47e3
  • 7.47e3
75.00
  • 75.00
AEIR
  • AEIR
UBERON:0002100trunk
  • ZFS:0000029Pharyngula:Prim-5
1.07e4
  • 1.07e4
64.28
  • 64.28
AEIR
  • AEIR
UBERON:0001555digestive tract
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000066fully formed stage
1.12e4
  • 1.12e4
  • 1.45e4
62.49
  • 62.49
  • 51.52
AEIR
  • AEIR
  • AEIR
UBERON:0000965lens of camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
1.24e4
  • 1.24e4
58.33
  • 58.33
AEIR
  • AEIR
UBERON:0008897fin
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000104life cycle
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000033Hatching:Long-pec
1.34e4
  • 1.34e4
  • 1.46e4
  • 1.49e4
  • 1.49e4
54.99
  • 54.99
  • 51.22
  • 49.99
  • 49.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002539pharyngeal arch
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
1.36e4
  • 1.36e4
  • 1.40e4
  • 1.40e4
54.53
  • 54.53
  • 53.10
  • 53.10
AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

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