D. rerio Gene: ltbp3 - ENSDARG00000035682 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000035682
Nameltbp3
Descriptionlatent transforming growth factor beta binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-060526-130]
OrganismDanio rerio (zebrafish)
Synonym(s)si:ch211-247o20.1

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
375
  • 375
98.75
  • 98.75
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000035Larval:Protruding-mouth
1.45e3
  • 1.45e3
  • 2.36e3
  • 9.44e3
  • 1.21e4
95.16
  • 95.16
  • 92.09
  • 68.40
  • 59.59
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
2.59e3
  • 2.59e3
91.34
  • 91.34
AEIR
  • AEIR
UBERON:0007287presumptive bulbus arteriosus
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
2.99e3
  • 2.99e3
  • 7.47e3
  • 1.49e4
90.00
  • 90.00
  • 75.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
3.11e3
  • 3.11e3
89.59
  • 89.59
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
3.23e3
  • 3.23e3
  • 7.56e3
89.19
  • 89.19
  • 74.69
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
3.89e3
  • 3.89e3
  • 1.58e4
86.98
  • 86.98
  • 46.94
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
3.99e3
  • 3.99e3
86.65
  • 86.65
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
4.80e3
  • 4.80e3
83.93
  • 83.93
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
5.46e3
  • 5.46e3
81.71
  • 81.71
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
6.26e3
  • 6.26e3
79.05
  • 79.05
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
6.27e3
  • 6.27e3
79.00
  • 79.00
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
8.24e3
  • 8.24e3
72.41
  • 72.41
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
9.29e3
  • 9.29e3
68.89
  • 68.89
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000042Juvenile:Days 30-44
  • UBERON:0000106zygote stage
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000068embryo stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
  • ZFS:0000026Segmentation:14-19 somites
9.41e3
  • 9.41e3
  • 1.29e4
  • 1.38e4
  • 1.41e4
  • 1.46e4
  • 1.47e4
  • 1.48e4
  • 1.49e4
  • 1.49e4
  • 1.50e4
  • 1.54e4
  • 1.54e4
  • 1.56e4
  • 1.57e4
  • 1.63e4
  • 1.78e4
68.50
  • 68.50
  • 56.66
  • 53.85
  • 52.87
  • 51.00
  • 50.88
  • 50.50
  • 50.10
  • 50.04
  • 49.80
  • 48.49
  • 48.30
  • 47.71
  • 47.38
  • 45.48
  • 40.38
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
9.66e3
  • 9.66e3
67.67
  • 67.67
AEIR
  • AEIR
UBERON:0004152bulbus arteriosus
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000033Hatching:Long-pec
9.96e3
  • 9.96e3
  • 1.19e4
66.67
  • 66.67
  • 60.00
AEIR
  • AEIR
  • AEIR
UBERON:0002328notochord
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
1.05e4
  • 1.05e4
  • 1.32e4
64.98
  • 64.98
  • 55.97
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
1.11e4
  • 1.11e4
  • 1.27e4
  • 1.33e4
62.78
  • 62.78
  • 57.61
  • 55.31
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003084heart primordium
  • ZFS:0000027Segmentation:20-25 somites
1.12e4
  • 1.12e4
62.49
  • 62.49
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.20e4
  • 1.20e4
  • 1.31e4
59.73
  • 59.73
  • 56.14
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.23e4
  • 1.23e4
58.95
  • 58.95
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.25e4
  • 1.25e4
58.13
  • 58.13
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
1.25e4
  • 1.25e4
  • 1.32e4
  • 1.35e4
  • 1.35e4
  • 1.46e4
  • 1.62e4
  • 1.81e4
58.11
  • 58.11
  • 55.90
  • 54.93
  • 54.82
  • 51.26
  • 45.70
  • 39.27
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
1.32e4
  • 1.32e4
  • 1.77e4
55.74
  • 55.74
  • 40.62
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
1.38e4
  • 1.38e4
53.74
  • 53.74
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
1.40e4
  • 1.40e4
  • 1.52e4
  • 1.54e4
  • 1.59e4
  • 1.68e4
53.00
  • 53.00
  • 49.18
  • 48.53
  • 46.67
  • 43.69
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2001467pharyngeal mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.55e4
  • 1.55e4
48.01
  • 48.01
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.73e4
  • 1.73e4
41.96
  • 41.96
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

Do not show this banner again