D. rerio Gene: si:ch211-206i14.2 - ENSDARG00000035796 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000035796
Namesi:ch211-206i14.2
Descriptionsi:ch211-206i14.2 [Source:ZFIN;Acc:ZDB-GENE-110407-4]
OrganismDanio rerio (zebrafish)
Synonym(s)e-cadh-2

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.14e4
  • 1.14e4
61.77
  • 61.77
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.61e4
  • 1.61e4
46.01
  • 46.01
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.93e4
  • 1.93e4
35.48
  • 35.48
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
2.17e4
  • 2.17e4
  • 2.23e4
  • 2.41e4
27.24
  • 27.24
  • 25.41
  • 19.30
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
2.21e4
  • 2.21e4
25.86
  • 25.86
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSDARG00000035796 (si:ch211-206i14.2)
Uniprot/SPTREMBLF1QMV1, F1QMV1_DANRE, F8W505, F8W505_DANRE
ZFINZDB-GENE-110407-4 (si:ch211-206i14.2)

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